Protein–RNA interactions for Protein: Q99742

NPAS1, Neuronal PAS domain-containing protein 1, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS1Q99742 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
NPAS1Q99742 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS1Q99742 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS1Q99742 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.17■□□□□ 0.34
NPAS1Q99742 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.17■□□□□ 0.34
NPAS1Q99742 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
NPAS1Q99742 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS1Q99742 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS1Q99742 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS1Q99742 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
NPAS1Q99742 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
NPAS1Q99742 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
NPAS1Q99742 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NPAS1Q99742 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS1Q99742 AC006333.2-201ENST00000607957 2099 ntBASIC17.16■□□□□ 0.34
NPAS1Q99742 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
NPAS1Q99742 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS1Q99742 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.16■□□□□ 0.34
NPAS1Q99742 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS1Q99742 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
NPAS1Q99742 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.16■□□□□ 0.34
NPAS1Q99742 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS1Q99742 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS1Q99742 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS1Q99742 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.16■□□□□ 0.34
NPAS1Q99742 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC17.16■□□□□ 0.34
NPAS1Q99742 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
NPAS1Q99742 AC073912.3-201ENST00000624414 853 ntBASIC17.16■□□□□ 0.34
NPAS1Q99742 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS1Q99742 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS1Q99742 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.16■□□□□ 0.34
NPAS1Q99742 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS1Q99742 LTB4R2-202ENST00000528054 3092 ntBASIC17.16■□□□□ 0.34
NPAS1Q99742 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NPAS1Q99742 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.16■□□□□ 0.34
NPAS1Q99742 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
NPAS1Q99742 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS1Q99742 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
NPAS1Q99742 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS1Q99742 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.16■□□□□ 0.34
NPAS1Q99742 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
NPAS1Q99742 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC17.15■□□□□ 0.34
NPAS1Q99742 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS1Q99742 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS1Q99742 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS1Q99742 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS1Q99742 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC17.15■□□□□ 0.34
NPAS1Q99742 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
NPAS1Q99742 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS1Q99742 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS1Q99742 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS1Q99742 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS1Q99742 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS1Q99742 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
NPAS1Q99742 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS1Q99742 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.15■□□□□ 0.34
NPAS1Q99742 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS1Q99742 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
NPAS1Q99742 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.15■□□□□ 0.34
NPAS1Q99742 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.15■□□□□ 0.34
NPAS1Q99742 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.15■□□□□ 0.34
NPAS1Q99742 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.15■□□□□ 0.34
NPAS1Q99742 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.15■□□□□ 0.34
NPAS1Q99742 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC17.15■□□□□ 0.34
NPAS1Q99742 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.15■□□□□ 0.34
NPAS1Q99742 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.15■□□□□ 0.34
NPAS1Q99742 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.15■□□□□ 0.34
NPAS1Q99742 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS1Q99742 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS1Q99742 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC17.15■□□□□ 0.34
NPAS1Q99742 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC17.15■□□□□ 0.34
NPAS1Q99742 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS1Q99742 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS1Q99742 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
NPAS1Q99742 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS1Q99742 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
NPAS1Q99742 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS1Q99742 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS1Q99742 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS1Q99742 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
NPAS1Q99742 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS1Q99742 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS1Q99742 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC17.14■□□□□ 0.33
NPAS1Q99742 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS1Q99742 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.14■□□□□ 0.33
NPAS1Q99742 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS1Q99742 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS1Q99742 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS1Q99742 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS1Q99742 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.14■□□□□ 0.33
NPAS1Q99742 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS1Q99742 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC17.14■□□□□ 0.33
NPAS1Q99742 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.14■□□□□ 0.33
NPAS1Q99742 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
NPAS1Q99742 AL023803.3-201ENST00000615559 522 ntBASIC17.14■□□□□ 0.33
NPAS1Q99742 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC17.14■□□□□ 0.33
NPAS1Q99742 AC133561.5-201ENST00000635547 218 ntBASIC17.14■□□□□ 0.33
NPAS1Q99742 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
NPAS1Q99742 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
NPAS1Q99742 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 47.6 ms