Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
NR1H4Q96RI1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
NR1H4Q96RI1 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.77■□□□□ 0.44
NR1H4Q96RI1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC17.77■□□□□ 0.44
NR1H4Q96RI1 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC17.77■□□□□ 0.44
NR1H4Q96RI1 AC083906.6-201ENST00000641366 219 ntBASIC17.77■□□□□ 0.44
NR1H4Q96RI1 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
NR1H4Q96RI1 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
NR1H4Q96RI1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.77■□□□□ 0.44
NR1H4Q96RI1 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.77■□□□□ 0.43
NR1H4Q96RI1 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NR1H4Q96RI1 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NR1H4Q96RI1 FERMT2-203ENST00000395631 3369 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NR1H4Q96RI1 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NR1H4Q96RI1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.77■□□□□ 0.43
NR1H4Q96RI1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
NR1H4Q96RI1 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
NR1H4Q96RI1 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.43
NR1H4Q96RI1 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NR1H4Q96RI1 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.77■□□□□ 0.43
NR1H4Q96RI1 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 ADAMTS13-204ENST00000371911 1155 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
NR1H4Q96RI1 PHGDH-210ENST00000641115 1638 ntBASIC17.76■□□□□ 0.43
NR1H4Q96RI1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 MIR572-201ENST00000384983 95 ntBASIC17.75■□□□□ 0.43
NR1H4Q96RI1 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 TJP1-201ENST00000346128 7950 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NR1H4Q96RI1 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 AL162727.3-201ENST00000635661 2787 ntBASIC17.74■□□□□ 0.43
NR1H4Q96RI1 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 AC008894.3-201ENST00000624324 3103 ntBASIC17.74■□□□□ 0.43
NR1H4Q96RI1 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NR1H4Q96RI1 EBPL-204ENST00000378272 766 ntTSL 3 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms