Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 PHB2-202ENST00000440277 996 ntTSL 5 BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC19.42■□□□□ 0.7
RPRD1AQ96P16 KRT8P45-201ENST00000414328 1447 ntBASIC19.42■□□□□ 0.7
RPRD1AQ96P16 AC073508.3-201ENST00000619697 1419 ntBASIC19.42■□□□□ 0.7
RPRD1AQ96P16 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPRD1AQ96P16 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.41■□□□□ 0.7
RPRD1AQ96P16 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPRD1AQ96P16 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.41■□□□□ 0.7
RPRD1AQ96P16 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC19.41■□□□□ 0.7
RPRD1AQ96P16 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPRD1AQ96P16 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
RPRD1AQ96P16 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPRD1AQ96P16 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPRD1AQ96P16 TMPOP1-202ENST00000424642 1267 ntBASIC19.41■□□□□ 0.7
RPRD1AQ96P16 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC19.41■□□□□ 0.7
RPRD1AQ96P16 MCCD1P1-208ENST00000445732 328 ntBASIC19.41■□□□□ 0.7
RPRD1AQ96P16 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
RPRD1AQ96P16 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPRD1AQ96P16 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
RPRD1AQ96P16 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RPRD1AQ96P16 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPRD1AQ96P16 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPRD1AQ96P16 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RPRD1AQ96P16 RCC2P3-201ENST00000418112 1537 ntBASIC19.41■□□□□ 0.7
RPRD1AQ96P16 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 LGALS8-AS1-201ENST00000487567 1457 ntBASIC19.4■□□□□ 0.7
RPRD1AQ96P16 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.4■□□□□ 0.7
RPRD1AQ96P16 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
RPRD1AQ96P16 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
RPRD1AQ96P16 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
RPRD1AQ96P16 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
RPRD1AQ96P16 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.39■□□□□ 0.7
RPRD1AQ96P16 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 CFL2-205ENST00000555765 632 ntTSL 2 BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
RPRD1AQ96P16 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms