Protein–RNA interactions for Protein: Q96JY6

PDLIM2, PDZ and LIM domain protein 2, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2Q96JY6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
PDLIM2Q96JY6 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDLIM2Q96JY6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDLIM2Q96JY6 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDLIM2Q96JY6 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDLIM2Q96JY6 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
PDLIM2Q96JY6 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDLIM2Q96JY6 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
PDLIM2Q96JY6 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.85■□□□□ 0.93
PDLIM2Q96JY6 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PDLIM2Q96JY6 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PDLIM2Q96JY6 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
PDLIM2Q96JY6 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM2Q96JY6 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
PDLIM2Q96JY6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.84■□□□□ 0.93
PDLIM2Q96JY6 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM2Q96JY6 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
PDLIM2Q96JY6 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM2Q96JY6 GAS2L1P1-201ENST00000420145 1480 ntBASIC20.84■□□□□ 0.93
PDLIM2Q96JY6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM2Q96JY6 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC20.84■□□□□ 0.93
PDLIM2Q96JY6 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
PDLIM2Q96JY6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
PDLIM2Q96JY6 CYP2T3P-201ENST00000601990 817 ntBASIC20.84■□□□□ 0.93
PDLIM2Q96JY6 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.84■□□□□ 0.93
PDLIM2Q96JY6 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM2Q96JY6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM2Q96JY6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM2Q96JY6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
PDLIM2Q96JY6 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PDLIM2Q96JY6 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.93
PDLIM2Q96JY6 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDLIM2Q96JY6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDLIM2Q96JY6 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDLIM2Q96JY6 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDLIM2Q96JY6 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDLIM2Q96JY6 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDLIM2Q96JY6 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.83■□□□□ 0.93
PDLIM2Q96JY6 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDLIM2Q96JY6 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC20.83■□□□□ 0.93
PDLIM2Q96JY6 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
PDLIM2Q96JY6 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
PDLIM2Q96JY6 MIR638-201ENST00000385237 100 ntBASIC20.83■□□□□ 0.93
PDLIM2Q96JY6 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.93
PDLIM2Q96JY6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
PDLIM2Q96JY6 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.83■□□□□ 0.93
PDLIM2Q96JY6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.83■□□□□ 0.93
PDLIM2Q96JY6 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC20.83■□□□□ 0.93
PDLIM2Q96JY6 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC20.83■□□□□ 0.93
PDLIM2Q96JY6 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.83■□□□□ 0.92
PDLIM2Q96JY6 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDLIM2Q96JY6 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.83■□□□□ 0.92
PDLIM2Q96JY6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC20.83■□□□□ 0.92
PDLIM2Q96JY6 CLDN11-201ENST00000064724 2169 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
PDLIM2Q96JY6 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.83■□□□□ 0.92
PDLIM2Q96JY6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM2Q96JY6 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.82■□□□□ 0.92
PDLIM2Q96JY6 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM2Q96JY6 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PDLIM2Q96JY6 AC006116.8-202ENST00000587620 1550 ntBASIC20.82■□□□□ 0.92
PDLIM2Q96JY6 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM2Q96JY6 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PDLIM2Q96JY6 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PDLIM2Q96JY6 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM2Q96JY6 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC20.82■□□□□ 0.92
PDLIM2Q96JY6 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM2Q96JY6 HLA-DQB1-201ENST00000374943 1656 ntBASIC20.82■□□□□ 0.92
PDLIM2Q96JY6 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.82■□□□□ 0.92
PDLIM2Q96JY6 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC20.82■□□□□ 0.92
PDLIM2Q96JY6 LINC00602-201ENST00000629776 2065 ntBASIC20.82■□□□□ 0.92
PDLIM2Q96JY6 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
PDLIM2Q96JY6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC20.82■□□□□ 0.92
PDLIM2Q96JY6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM2Q96JY6 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
PDLIM2Q96JY6 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM2Q96JY6 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
PDLIM2Q96JY6 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC20.82■□□□□ 0.92
PDLIM2Q96JY6 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms