Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
TIMD4Q96H15 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TIMD4Q96H15 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.85■□□□□ 0.13
TIMD4Q96H15 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
TIMD4Q96H15 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
TIMD4Q96H15 KRT8P3-201ENST00000519669 1449 ntBASIC15.85■□□□□ 0.13
TIMD4Q96H15 MED25-212ENST00000618715 1467 ntTSL 5 BASIC15.84■□□□□ 0.13
TIMD4Q96H15 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC15.84■□□□□ 0.13
TIMD4Q96H15 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TIMD4Q96H15 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
TIMD4Q96H15 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC15.84■□□□□ 0.13
TIMD4Q96H15 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
TIMD4Q96H15 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TIMD4Q96H15 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TIMD4Q96H15 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC15.84■□□□□ 0.13
TIMD4Q96H15 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.84■□□□□ 0.13
TIMD4Q96H15 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TIMD4Q96H15 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.84■□□□□ 0.13
TIMD4Q96H15 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC15.84■□□□□ 0.13
TIMD4Q96H15 AC117947.1-201ENST00000427448 529 ntBASIC15.84■□□□□ 0.13
TIMD4Q96H15 MCCD1P1-208ENST00000445732 328 ntBASIC15.84■□□□□ 0.13
TIMD4Q96H15 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
TIMD4Q96H15 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC15.84■□□□□ 0.13
TIMD4Q96H15 KRT18P35-201ENST00000510488 1269 ntBASIC15.84■□□□□ 0.13
TIMD4Q96H15 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TIMD4Q96H15 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TIMD4Q96H15 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TIMD4Q96H15 LTBR-211ENST00000543190 785 ntTSL 3 BASIC15.84■□□□□ 0.13
TIMD4Q96H15 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.84■□□□□ 0.13
TIMD4Q96H15 AL445228.2-201ENST00000605589 952 ntBASIC15.84■□□□□ 0.13
TIMD4Q96H15 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC15.84■□□□□ 0.13
TIMD4Q96H15 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TIMD4Q96H15 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.84■□□□□ 0.13
TIMD4Q96H15 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
TIMD4Q96H15 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TIMD4Q96H15 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TIMD4Q96H15 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC15.84■□□□□ 0.13
TIMD4Q96H15 KRT8P45-201ENST00000414328 1447 ntBASIC15.84■□□□□ 0.13
TIMD4Q96H15 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.84■□□□□ 0.13
TIMD4Q96H15 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
TIMD4Q96H15 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TIMD4Q96H15 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC15.84■□□□□ 0.13
TIMD4Q96H15 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
TIMD4Q96H15 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
TIMD4Q96H15 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC15.83■□□□□ 0.13
TIMD4Q96H15 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
TIMD4Q96H15 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC15.83■□□□□ 0.13
TIMD4Q96H15 BID-204ENST00000399767 2129 ntTSL 2 BASIC15.83■□□□□ 0.13
TIMD4Q96H15 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.83■□□□□ 0.13
TIMD4Q96H15 AC125437.2-201ENST00000625180 2167 ntBASIC15.83■□□□□ 0.13
TIMD4Q96H15 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC15.83■□□□□ 0.13
TIMD4Q96H15 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TIMD4Q96H15 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
TIMD4Q96H15 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC15.83■□□□□ 0.12
TIMD4Q96H15 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.83■□□□□ 0.12
TIMD4Q96H15 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC15.83■□□□□ 0.12
TIMD4Q96H15 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC15.83■□□□□ 0.12
TIMD4Q96H15 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMD4Q96H15 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMD4Q96H15 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMD4Q96H15 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.83■□□□□ 0.12
TIMD4Q96H15 TSPY5P-201ENST00000426936 936 ntBASIC15.83■□□□□ 0.12
TIMD4Q96H15 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC15.83■□□□□ 0.12
TIMD4Q96H15 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMD4Q96H15 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
TIMD4Q96H15 HOMER2P1-201ENST00000455653 964 ntBASIC15.83■□□□□ 0.12
TIMD4Q96H15 AC022616.7-201ENST00000525383 220 ntBASIC15.83■□□□□ 0.12
TIMD4Q96H15 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC15.83■□□□□ 0.12
TIMD4Q96H15 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC15.83■□□□□ 0.12
TIMD4Q96H15 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC15.83■□□□□ 0.12
TIMD4Q96H15 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TIMD4Q96H15 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC15.83■□□□□ 0.12
TIMD4Q96H15 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TIMD4Q96H15 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TIMD4Q96H15 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC15.83■□□□□ 0.12
TIMD4Q96H15 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMD4Q96H15 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
TIMD4Q96H15 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TIMD4Q96H15 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMD4Q96H15 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMD4Q96H15 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
TIMD4Q96H15 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMD4Q96H15 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
TIMD4Q96H15 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMD4Q96H15 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
TIMD4Q96H15 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMD4Q96H15 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMD4Q96H15 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC15.82■□□□□ 0.12
TIMD4Q96H15 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMD4Q96H15 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMD4Q96H15 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TIMD4Q96H15 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
TIMD4Q96H15 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.82■□□□□ 0.12
TIMD4Q96H15 AC009947.2-201ENST00000444014 672 ntBASIC15.82■□□□□ 0.12
TIMD4Q96H15 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
TIMD4Q96H15 AC063952.2-201ENST00000498792 1227 ntBASIC15.82■□□□□ 0.12
TIMD4Q96H15 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.82■□□□□ 0.12
TIMD4Q96H15 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC15.82■□□□□ 0.12
TIMD4Q96H15 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.82■□□□□ 0.12
TIMD4Q96H15 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms