Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 AC026471.5-201ENST00000615068 467 ntBASIC19.23■□□□□ 0.67
CCDC97Q96F63 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC97Q96F63 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC97Q96F63 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.23■□□□□ 0.67
CCDC97Q96F63 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC97Q96F63 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC97Q96F63 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC97Q96F63 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC97Q96F63 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
CCDC97Q96F63 HTR7P1-201ENST00000538670 1336 ntBASIC19.23■□□□□ 0.67
CCDC97Q96F63 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC97Q96F63 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC97Q96F63 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
CCDC97Q96F63 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC97Q96F63 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC97Q96F63 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CCDC97Q96F63 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC97Q96F63 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC97Q96F63 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
CCDC97Q96F63 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC97Q96F63 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC97Q96F63 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC97Q96F63 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC97Q96F63 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC97Q96F63 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC97Q96F63 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC97Q96F63 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC97Q96F63 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC97Q96F63 AL353807.1-201ENST00000427475 662 ntBASIC19.22■□□□□ 0.67
CCDC97Q96F63 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC97Q96F63 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC97Q96F63 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.22■□□□□ 0.67
CCDC97Q96F63 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.22■□□□□ 0.67
CCDC97Q96F63 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC97Q96F63 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
CCDC97Q96F63 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
CCDC97Q96F63 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC97Q96F63 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC19.22■□□□□ 0.67
CCDC97Q96F63 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC97Q96F63 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
CCDC97Q96F63 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC97Q96F63 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC97Q96F63 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC97Q96F63 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC97Q96F63 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC97Q96F63 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC97Q96F63 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
CCDC97Q96F63 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC97Q96F63 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
CCDC97Q96F63 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CCDC97Q96F63 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
CCDC97Q96F63 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC97Q96F63 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC97Q96F63 MMP23A-201ENST00000234610 1017 ntBASIC19.21■□□□□ 0.67
CCDC97Q96F63 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC97Q96F63 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
CCDC97Q96F63 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC97Q96F63 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC97Q96F63 ZNF815P-204ENST00000434898 1737 ntBASIC19.21■□□□□ 0.67
CCDC97Q96F63 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC97Q96F63 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC97Q96F63 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC97Q96F63 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC97Q96F63 NT5C-211ENST00000582170 653 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC97Q96F63 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC97Q96F63 AC004264.1-201ENST00000608354 794 ntBASIC19.21■□□□□ 0.67
CCDC97Q96F63 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.21■□□□□ 0.67
CCDC97Q96F63 AL590326.2-201ENST00000625139 305 ntBASIC19.21■□□□□ 0.67
CCDC97Q96F63 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.21■□□□□ 0.67
CCDC97Q96F63 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC97Q96F63 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC97Q96F63 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.21■□□□□ 0.67
CCDC97Q96F63 AC104417.2-201ENST00000562989 1793 ntBASIC19.21■□□□□ 0.67
CCDC97Q96F63 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
CCDC97Q96F63 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC19.21■□□□□ 0.67
CCDC97Q96F63 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.21■□□□□ 0.67
CCDC97Q96F63 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.21■□□□□ 0.67
CCDC97Q96F63 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC97Q96F63 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC97Q96F63 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC97Q96F63 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC97Q96F63 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC97Q96F63 SENP6-205ENST00000447266 6501 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC97Q96F63 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC97Q96F63 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC97Q96F63 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC97Q96F63 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC97Q96F63 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.2■□□□□ 0.66
CCDC97Q96F63 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC97Q96F63 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.2■□□□□ 0.66
CCDC97Q96F63 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.2■□□□□ 0.66
CCDC97Q96F63 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC97Q96F63 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
CCDC97Q96F63 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC97Q96F63 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
CCDC97Q96F63 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
CCDC97Q96F63 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
CCDC97Q96F63 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
CCDC97Q96F63 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC97Q96F63 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms