Protein–RNA interactions for Protein: Q96DD0

LRRC39, Leucine-rich repeat-containing protein 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC39Q96DD0 AC131212.4-201ENST00000623606 975 ntBASIC19.06■□□□□ 0.64
LRRC39Q96DD0 MYC-208ENST00000641036 567 ntBASIC19.06■□□□□ 0.64
LRRC39Q96DD0 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
LRRC39Q96DD0 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 AL023875.1-201ENST00000640777 796 ntBASIC19.05■□□□□ 0.64
LRRC39Q96DD0 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
LRRC39Q96DD0 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 AC020763.4-201ENST00000623414 4170 ntBASIC19.04■□□□□ 0.64
LRRC39Q96DD0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 SERF2-207ENST00000409614 582 ntTSL 2 BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 RNA5SP413-201ENST00000516373 109 ntBASIC19.04■□□□□ 0.64
LRRC39Q96DD0 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 AC233263.1-201ENST00000578059 224 ntBASIC19.04■□□□□ 0.64
LRRC39Q96DD0 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
LRRC39Q96DD0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
LRRC39Q96DD0 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms