Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
ECHDC3Q96DC8 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 COX11P1-201ENST00000489116 835 ntBASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
ECHDC3Q96DC8 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 AP000523.1-201ENST00000398242 1049 ntBASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 AC139887.4-201ENST00000607877 719 ntBASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 MTMR9LP-203ENST00000426597 1545 ntBASIC18.84■□□□□ 0.61
ECHDC3Q96DC8 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
ECHDC3Q96DC8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ECHDC3Q96DC8 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
ECHDC3Q96DC8 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
ECHDC3Q96DC8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.83■□□□□ 0.6
ECHDC3Q96DC8 MIR564-202ENST00000385049 94 ntBASIC18.83■□□□□ 0.6
ECHDC3Q96DC8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC18.83■□□□□ 0.6
ECHDC3Q96DC8 DUX4L26-201ENST00000489078 1255 ntBASIC18.83■□□□□ 0.6
ECHDC3Q96DC8 YBX1P2-201ENST00000489612 999 ntBASIC18.83■□□□□ 0.6
ECHDC3Q96DC8 AL031432.5-201ENST00000641059 760 ntBASIC18.83■□□□□ 0.6
ECHDC3Q96DC8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.83■□□□□ 0.6
ECHDC3Q96DC8 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ECHDC3Q96DC8 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.83■□□□□ 0.6
ECHDC3Q96DC8 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ECHDC3Q96DC8 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ECHDC3Q96DC8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.83■□□□□ 0.6
ECHDC3Q96DC8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ECHDC3Q96DC8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
ECHDC3Q96DC8 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.6
ECHDC3Q96DC8 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
ECHDC3Q96DC8 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ECHDC3Q96DC8 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms