Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 TERC-201ENST00000602385 541 ntBASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 AC073314.1-201ENST00000568729 2216 ntBASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC20.46■□□□□ 0.87
TRIM43Q96BQ3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 AL049840.3-201ENST00000602669 611 ntBASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
TRIM43Q96BQ3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 RCC2P3-201ENST00000418112 1537 ntBASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 MINOS1P3-201ENST00000457048 203 ntBASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 AF186996.4-201ENST00000467186 377 ntBASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 VENTXP7-201ENST00000475503 772 ntBASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 RPL13AP23-201ENST00000480739 586 ntBASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
TRIM43Q96BQ3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM43Q96BQ3 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM43Q96BQ3 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM43Q96BQ3 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM43Q96BQ3 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20.43■□□□□ 0.86
TRIM43Q96BQ3 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM43Q96BQ3 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC20.43■□□□□ 0.86
TRIM43Q96BQ3 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.43■□□□□ 0.86
TRIM43Q96BQ3 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.43■□□□□ 0.86
TRIM43Q96BQ3 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM43Q96BQ3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM43Q96BQ3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM43Q96BQ3 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM43Q96BQ3 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC20.43■□□□□ 0.86
TRIM43Q96BQ3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
TRIM43Q96BQ3 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.43■□□□□ 0.86
TRIM43Q96BQ3 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM43Q96BQ3 AC012676.1-201ENST00000574705 1949 ntBASIC20.43■□□□□ 0.86
TRIM43Q96BQ3 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM43Q96BQ3 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM43Q96BQ3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
TRIM43Q96BQ3 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.42■□□□□ 0.86
TRIM43Q96BQ3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.42■□□□□ 0.86
TRIM43Q96BQ3 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
TRIM43Q96BQ3 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms