Protein–RNA interactions for Protein: Q93084

ATP2A3, Sarcoplasmic/endoplasmic reticulum calcium ATPase 3, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3Q93084 COX11P1-201ENST00000489116 835 ntBASIC19.83■□□□□ 0.77
ATP2A3Q93084 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
ATP2A3Q93084 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC19.83■□□□□ 0.77
ATP2A3Q93084 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.83■□□□□ 0.77
ATP2A3Q93084 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ATP2A3Q93084 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.83■□□□□ 0.77
ATP2A3Q93084 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.83■□□□□ 0.77
ATP2A3Q93084 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP2A3Q93084 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP2A3Q93084 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC19.83■□□□□ 0.76
ATP2A3Q93084 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ATP2A3Q93084 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP2A3Q93084 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ATP2A3Q93084 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP2A3Q93084 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.83■□□□□ 0.76
ATP2A3Q93084 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP2A3Q93084 BCL2-203ENST00000589955 5011 ntBASIC19.83■□□□□ 0.76
ATP2A3Q93084 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ATP2A3Q93084 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.83■□□□□ 0.76
ATP2A3Q93084 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.83■□□□□ 0.76
ATP2A3Q93084 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A3Q93084 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A3Q93084 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A3Q93084 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.82■□□□□ 0.76
ATP2A3Q93084 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A3Q93084 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP2A3Q93084 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.82■□□□□ 0.76
ATP2A3Q93084 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.82■□□□□ 0.76
ATP2A3Q93084 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP2A3Q93084 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.82■□□□□ 0.76
ATP2A3Q93084 YBX1P2-201ENST00000489612 999 ntBASIC19.82■□□□□ 0.76
ATP2A3Q93084 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
ATP2A3Q93084 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
ATP2A3Q93084 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
ATP2A3Q93084 AC141257.4-201ENST00000634557 245 ntBASIC19.82■□□□□ 0.76
ATP2A3Q93084 AC136944.6-201ENST00000634818 245 ntBASIC19.82■□□□□ 0.76
ATP2A3Q93084 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A3Q93084 AC020763.4-201ENST00000623414 4170 ntBASIC19.82■□□□□ 0.76
ATP2A3Q93084 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.82■□□□□ 0.76
ATP2A3Q93084 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.82■□□□□ 0.76
ATP2A3Q93084 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A3Q93084 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.82■□□□□ 0.76
ATP2A3Q93084 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
ATP2A3Q93084 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ATP2A3Q93084 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.82■□□□□ 0.76
ATP2A3Q93084 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A3Q93084 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A3Q93084 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
ATP2A3Q93084 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP2A3Q93084 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP2A3Q93084 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A3Q93084 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A3Q93084 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP2A3Q93084 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP2A3Q93084 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A3Q93084 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.81■□□□□ 0.76
ATP2A3Q93084 FAM8A6P-201ENST00000407496 1135 ntBASIC19.81■□□□□ 0.76
ATP2A3Q93084 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP2A3Q93084 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
ATP2A3Q93084 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A3Q93084 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.81■□□□□ 0.76
ATP2A3Q93084 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.81■□□□□ 0.76
ATP2A3Q93084 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A3Q93084 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
ATP2A3Q93084 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.81■□□□□ 0.76
ATP2A3Q93084 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A3Q93084 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
ATP2A3Q93084 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A3Q93084 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A3Q93084 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
ATP2A3Q93084 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ATP2A3Q93084 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A3Q93084 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.8■□□□□ 0.76
ATP2A3Q93084 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
ATP2A3Q93084 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A3Q93084 TNXA-203ENST00000507684 2038 ntBASIC19.8■□□□□ 0.76
ATP2A3Q93084 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
ATP2A3Q93084 Z82202.1-201ENST00000623446 1880 ntBASIC19.8■□□□□ 0.76
ATP2A3Q93084 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A3Q93084 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A3Q93084 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC19.8■□□□□ 0.76
ATP2A3Q93084 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A3Q93084 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
ATP2A3Q93084 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A3Q93084 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.8■□□□□ 0.76
ATP2A3Q93084 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A3Q93084 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A3Q93084 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A3Q93084 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.8■□□□□ 0.76
ATP2A3Q93084 TSPY5P-201ENST00000426936 936 ntBASIC19.8■□□□□ 0.76
ATP2A3Q93084 AC092647.4-201ENST00000457211 535 ntBASIC19.8■□□□□ 0.76
ATP2A3Q93084 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.8■□□□□ 0.76
ATP2A3Q93084 PRSS44-201ENST00000515154 1146 ntBASIC19.8■□□□□ 0.76
ATP2A3Q93084 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.8■□□□□ 0.76
ATP2A3Q93084 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ATP2A3Q93084 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.8■□□□□ 0.76
ATP2A3Q93084 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
ATP2A3Q93084 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.8■□□□□ 0.76
ATP2A3Q93084 AL031432.5-201ENST00000641059 760 ntBASIC19.8■□□□□ 0.76
ATP2A3Q93084 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms