Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
DDX1Q92499 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.09■□□□□ 0.81
DDX1Q92499 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.09■□□□□ 0.81
DDX1Q92499 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX1Q92499 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.09■□□□□ 0.81
DDX1Q92499 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.09■□□□□ 0.81
DDX1Q92499 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX1Q92499 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC20.09■□□□□ 0.81
DDX1Q92499 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.09■□□□□ 0.81
DDX1Q92499 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
DDX1Q92499 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX1Q92499 REXO1L10P-201ENST00000615707 1290 ntBASIC20.09■□□□□ 0.81
DDX1Q92499 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
DDX1Q92499 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC20.09■□□□□ 0.81
DDX1Q92499 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX1Q92499 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX1Q92499 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.09■□□□□ 0.81
DDX1Q92499 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX1Q92499 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
DDX1Q92499 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC20.09■□□□□ 0.81
DDX1Q92499 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.08■□□□□ 0.81
DDX1Q92499 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX1Q92499 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
DDX1Q92499 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX1Q92499 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
DDX1Q92499 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX1Q92499 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX1Q92499 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX1Q92499 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX1Q92499 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
DDX1Q92499 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
DDX1Q92499 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC20.08■□□□□ 0.81
DDX1Q92499 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
DDX1Q92499 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
DDX1Q92499 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.08■□□□□ 0.81
DDX1Q92499 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
DDX1Q92499 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.08■□□□□ 0.8
DDX1Q92499 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DDX1Q92499 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
DDX1Q92499 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
DDX1Q92499 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.07■□□□□ 0.8
DDX1Q92499 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX1Q92499 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX1Q92499 AC009113.1-201ENST00000570267 2443 ntBASIC20.07■□□□□ 0.8
DDX1Q92499 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC20.07■□□□□ 0.8
DDX1Q92499 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX1Q92499 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC20.07■□□□□ 0.8
DDX1Q92499 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.07■□□□□ 0.8
DDX1Q92499 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX1Q92499 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX1Q92499 AC005521.1-201ENST00000393351 872 ntBASIC20.07■□□□□ 0.8
DDX1Q92499 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DDX1Q92499 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.07■□□□□ 0.8
DDX1Q92499 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.07■□□□□ 0.8
DDX1Q92499 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.07■□□□□ 0.8
DDX1Q92499 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
DDX1Q92499 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC20.07■□□□□ 0.8
DDX1Q92499 AC104581.1-202ENST00000635932 2618 ntBASIC20.07■□□□□ 0.8
DDX1Q92499 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC20.07■□□□□ 0.8
DDX1Q92499 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC20.07■□□□□ 0.8
DDX1Q92499 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX1Q92499 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC20.07■□□□□ 0.8
DDX1Q92499 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
DDX1Q92499 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
DDX1Q92499 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX1Q92499 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX1Q92499 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.06■□□□□ 0.8
DDX1Q92499 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC20.06■□□□□ 0.8
DDX1Q92499 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX1Q92499 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX1Q92499 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX1Q92499 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX1Q92499 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.06■□□□□ 0.8
DDX1Q92499 AC113347.1-201ENST00000413321 391 ntBASIC20.06■□□□□ 0.8
DDX1Q92499 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
DDX1Q92499 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC20.06■□□□□ 0.8
DDX1Q92499 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC20.06■□□□□ 0.8
DDX1Q92499 DGCR10-201ENST00000609839 495 ntBASIC20.06■□□□□ 0.8
DDX1Q92499 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX1Q92499 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX1Q92499 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC20.06■□□□□ 0.8
DDX1Q92499 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX1Q92499 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX1Q92499 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX1Q92499 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX1Q92499 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
DDX1Q92499 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX1Q92499 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX1Q92499 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC20.05■□□□□ 0.8
DDX1Q92499 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC20.05■□□□□ 0.8
DDX1Q92499 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DDX1Q92499 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.05■□□□□ 0.8
DDX1Q92499 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX1Q92499 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC20.05■□□□□ 0.8
DDX1Q92499 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DDX1Q92499 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
DDX1Q92499 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.05■□□□□ 0.8
DDX1Q92499 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC20.05■□□□□ 0.8
DDX1Q92499 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
DDX1Q92499 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms