Protein–RNA interactions for Protein: Q8WU17

RNF139, E3 ubiquitin-protein ligase RNF139, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF139Q8WU17 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
RNF139Q8WU17 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
RNF139Q8WU17 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.8■□□□□ 0.76
RNF139Q8WU17 AP000974.1-201ENST00000623909 2387 ntBASIC19.8■□□□□ 0.76
RNF139Q8WU17 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RNF139Q8WU17 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF139Q8WU17 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF139Q8WU17 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.8■□□□□ 0.76
RNF139Q8WU17 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF139Q8WU17 BX323043.1-201ENST00000641006 1765 ntBASIC19.8■□□□□ 0.76
RNF139Q8WU17 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RNF139Q8WU17 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF139Q8WU17 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF139Q8WU17 AL049812.1-201ENST00000432563 2267 ntBASIC19.79■□□□□ 0.76
RNF139Q8WU17 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF139Q8WU17 AC087289.5-201ENST00000586076 3175 ntBASIC19.79■□□□□ 0.76
RNF139Q8WU17 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF139Q8WU17 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF139Q8WU17 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF139Q8WU17 FP475955.4-201ENST00000623131 1990 ntBASIC19.79■□□□□ 0.76
RNF139Q8WU17 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF139Q8WU17 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF139Q8WU17 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF139Q8WU17 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF139Q8WU17 HMGA1P5-201ENST00000412453 271 ntBASIC19.79■□□□□ 0.76
RNF139Q8WU17 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.79■□□□□ 0.76
RNF139Q8WU17 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
RNF139Q8WU17 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF139Q8WU17 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.79■□□□□ 0.76
RNF139Q8WU17 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF139Q8WU17 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF139Q8WU17 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RNF139Q8WU17 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF139Q8WU17 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.79■□□□□ 0.76
RNF139Q8WU17 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RNF139Q8WU17 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF139Q8WU17 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF139Q8WU17 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RNF139Q8WU17 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RNF139Q8WU17 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RNF139Q8WU17 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF139Q8WU17 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF139Q8WU17 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF139Q8WU17 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF139Q8WU17 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF139Q8WU17 AC113347.1-201ENST00000413321 391 ntBASIC19.78■□□□□ 0.76
RNF139Q8WU17 AL137013.1-201ENST00000432946 1228 ntBASIC19.78■□□□□ 0.76
RNF139Q8WU17 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
RNF139Q8WU17 ATP5G1P1-201ENST00000448724 379 ntBASIC19.78■□□□□ 0.76
RNF139Q8WU17 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.78■□□□□ 0.76
RNF139Q8WU17 AP003041.3-201ENST00000527151 707 ntBASIC19.78■□□□□ 0.76
RNF139Q8WU17 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF139Q8WU17 FAM87A-204ENST00000613235 858 ntBASIC19.78■□□□□ 0.76
RNF139Q8WU17 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF139Q8WU17 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF139Q8WU17 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF139Q8WU17 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RNF139Q8WU17 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.78■□□□□ 0.76
RNF139Q8WU17 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
RNF139Q8WU17 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.78■□□□□ 0.76
RNF139Q8WU17 AC098818.2-201ENST00000564925 2320 ntBASIC19.77■□□□□ 0.76
RNF139Q8WU17 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF139Q8WU17 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF139Q8WU17 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
RNF139Q8WU17 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.77■□□□□ 0.76
RNF139Q8WU17 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RNF139Q8WU17 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF139Q8WU17 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
RNF139Q8WU17 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
RNF139Q8WU17 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF139Q8WU17 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC19.77■□□□□ 0.76
RNF139Q8WU17 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.77■□□□□ 0.76
RNF139Q8WU17 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
RNF139Q8WU17 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
RNF139Q8WU17 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
RNF139Q8WU17 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
RNF139Q8WU17 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF139Q8WU17 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RNF139Q8WU17 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
RNF139Q8WU17 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF139Q8WU17 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.77■□□□□ 0.75
RNF139Q8WU17 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC19.77■□□□□ 0.75
RNF139Q8WU17 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
RNF139Q8WU17 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
RNF139Q8WU17 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF139Q8WU17 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
RNF139Q8WU17 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF139Q8WU17 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF139Q8WU17 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF139Q8WU17 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF139Q8WU17 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF139Q8WU17 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF139Q8WU17 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF139Q8WU17 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF139Q8WU17 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF139Q8WU17 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RNF139Q8WU17 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF139Q8WU17 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF139Q8WU17 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RNF139Q8WU17 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms