Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC22.95■■□□□ 1.26
SNED1Q8TER0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC22.95■■□□□ 1.26
SNED1Q8TER0 AC090616.6-201ENST00000582640 721 ntBASIC22.95■■□□□ 1.26
SNED1Q8TER0 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
SNED1Q8TER0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SNED1Q8TER0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SNED1Q8TER0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC22.95■■□□□ 1.26
SNED1Q8TER0 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SNED1Q8TER0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SNED1Q8TER0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC22.95■■□□□ 1.26
SNED1Q8TER0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC22.95■■□□□ 1.26
SNED1Q8TER0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC22.94■■□□□ 1.26
SNED1Q8TER0 KRT8P7-201ENST00000533003 1432 ntBASIC22.94■■□□□ 1.26
SNED1Q8TER0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SNED1Q8TER0 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC22.94■■□□□ 1.26
SNED1Q8TER0 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
SNED1Q8TER0 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SNED1Q8TER0 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SNED1Q8TER0 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC22.94■■□□□ 1.26
SNED1Q8TER0 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC22.94■■□□□ 1.26
SNED1Q8TER0 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC22.94■■□□□ 1.26
SNED1Q8TER0 CDV3-207ENST00000508481 661 ntTSL 3 BASIC22.94■■□□□ 1.26
SNED1Q8TER0 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC22.94■■□□□ 1.26
SNED1Q8TER0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC22.94■■□□□ 1.26
SNED1Q8TER0 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SNED1Q8TER0 AC120114.3-201ENST00000611923 658 ntBASIC22.94■■□□□ 1.26
SNED1Q8TER0 AL592071.1-201ENST00000611956 408 ntBASIC22.94■■□□□ 1.26
SNED1Q8TER0 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC22.94■■□□□ 1.26
SNED1Q8TER0 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SNED1Q8TER0 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC22.94■■□□□ 1.26
SNED1Q8TER0 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SNED1Q8TER0 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SNED1Q8TER0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC22.94■■□□□ 1.26
SNED1Q8TER0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SNED1Q8TER0 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC22.94■■□□□ 1.26
SNED1Q8TER0 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SNED1Q8TER0 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SNED1Q8TER0 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC22.94■■□□□ 1.26
SNED1Q8TER0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC22.94■■□□□ 1.26
SNED1Q8TER0 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC22.94■■□□□ 1.26
SNED1Q8TER0 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
SNED1Q8TER0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SNED1Q8TER0 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC22.93■■□□□ 1.26
SNED1Q8TER0 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC22.93■■□□□ 1.26
SNED1Q8TER0 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC22.93■■□□□ 1.26
SNED1Q8TER0 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC22.93■■□□□ 1.26
SNED1Q8TER0 RN7SL606P-201ENST00000472779 293 ntBASIC22.93■■□□□ 1.26
SNED1Q8TER0 AC091607.1-201ENST00000490318 1060 ntBASIC22.93■■□□□ 1.26
SNED1Q8TER0 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC22.93■■□□□ 1.26
SNED1Q8TER0 IGHV3OR16-7-201ENST00000604106 360 ntBASIC22.93■■□□□ 1.26
SNED1Q8TER0 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
SNED1Q8TER0 NME4-212ENST00000621774 904 ntTSL 3 BASIC22.93■■□□□ 1.26
SNED1Q8TER0 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC22.93■■□□□ 1.26
SNED1Q8TER0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC22.93■■□□□ 1.26
SNED1Q8TER0 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.93■■□□□ 1.26
SNED1Q8TER0 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC22.93■■□□□ 1.26
SNED1Q8TER0 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC22.93■■□□□ 1.26
SNED1Q8TER0 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC22.93■■□□□ 1.26
SNED1Q8TER0 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
SNED1Q8TER0 KRT18P23-201ENST00000435622 1283 ntBASIC22.92■■□□□ 1.26
SNED1Q8TER0 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC22.92■■□□□ 1.26
SNED1Q8TER0 FICD-205ENST00000552758 603 ntTSL 2 BASIC22.92■■□□□ 1.26
SNED1Q8TER0 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
SNED1Q8TER0 GPR32P1-201ENST00000601788 811 ntBASIC22.92■■□□□ 1.26
SNED1Q8TER0 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC22.92■■□□□ 1.26
SNED1Q8TER0 AC008556.1-201ENST00000610908 2040 ntBASIC22.92■■□□□ 1.26
SNED1Q8TER0 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
SNED1Q8TER0 RCC2P3-201ENST00000418112 1537 ntBASIC22.92■■□□□ 1.26
SNED1Q8TER0 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC22.92■■□□□ 1.26
SNED1Q8TER0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
SNED1Q8TER0 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SNED1Q8TER0 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
SNED1Q8TER0 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC22.92■■□□□ 1.26
SNED1Q8TER0 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
SNED1Q8TER0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC22.92■■□□□ 1.26
SNED1Q8TER0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
SNED1Q8TER0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC22.92■■□□□ 1.26
SNED1Q8TER0 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.91■■□□□ 1.26
SNED1Q8TER0 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNED1Q8TER0 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNED1Q8TER0 SAPCD2P3-201ENST00000455031 850 ntBASIC22.91■■□□□ 1.26
SNED1Q8TER0 PENK-208ENST00000523051 772 ntTSL 5 BASIC22.91■■□□□ 1.26
SNED1Q8TER0 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC22.91■■□□□ 1.26
SNED1Q8TER0 AC099336.1-202ENST00000602961 463 ntBASIC22.91■■□□□ 1.26
SNED1Q8TER0 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC22.91■■□□□ 1.26
SNED1Q8TER0 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC22.91■■□□□ 1.26
SNED1Q8TER0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC22.91■■□□□ 1.26
SNED1Q8TER0 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNED1Q8TER0 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
SNED1Q8TER0 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.91■■□□□ 1.26
SNED1Q8TER0 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNED1Q8TER0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.91■■□□□ 1.26
SNED1Q8TER0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNED1Q8TER0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNED1Q8TER0 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNED1Q8TER0 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNED1Q8TER0 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
SNED1Q8TER0 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC22.91■■□□□ 1.26
SNED1Q8TER0 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC22.91■■□□□ 1.26
SNED1Q8TER0 AF238378.1-201ENST00000526806 358 ntBASIC22.91■■□□□ 1.26
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms