Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
CLDND2Q8NHS1 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CLDND2Q8NHS1 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
CLDND2Q8NHS1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDND2Q8NHS1 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDND2Q8NHS1 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDND2Q8NHS1 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDND2Q8NHS1 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.03■□□□□ 0.16
CLDND2Q8NHS1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CLDND2Q8NHS1 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CLDND2Q8NHS1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CLDND2Q8NHS1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDND2Q8NHS1 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDND2Q8NHS1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CLDND2Q8NHS1 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDND2Q8NHS1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.16
CLDND2Q8NHS1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDND2Q8NHS1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC16.02■□□□□ 0.16
CLDND2Q8NHS1 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CLDND2Q8NHS1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDND2Q8NHS1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDND2Q8NHS1 AC007663.1-201ENST00000438948 1240 ntBASIC16.02■□□□□ 0.16
CLDND2Q8NHS1 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.02■□□□□ 0.16
CLDND2Q8NHS1 GPX4-207ENST00000589115 812 ntTSL 2 BASIC16.02■□□□□ 0.16
CLDND2Q8NHS1 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.02■□□□□ 0.16
CLDND2Q8NHS1 NTF6B-201ENST00000591913 560 ntBASIC16.02■□□□□ 0.16
CLDND2Q8NHS1 AC010653.2-201ENST00000623505 997 ntBASIC16.02■□□□□ 0.16
CLDND2Q8NHS1 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CLDND2Q8NHS1 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CLDND2Q8NHS1 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.02■□□□□ 0.15
CLDND2Q8NHS1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.02■□□□□ 0.15
CLDND2Q8NHS1 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.02■□□□□ 0.15
CLDND2Q8NHS1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDND2Q8NHS1 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDND2Q8NHS1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
CLDND2Q8NHS1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDND2Q8NHS1 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.02■□□□□ 0.15
CLDND2Q8NHS1 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
CLDND2Q8NHS1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
CLDND2Q8NHS1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 BX664615.1-201ENST00000443558 458 ntBASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 TSPY17P-201ENST00000450329 467 ntBASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 AC092338.2-201ENST00000568827 1415 ntBASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
CLDND2Q8NHS1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16■□□□□ 0.15
CLDND2Q8NHS1 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CLDND2Q8NHS1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDND2Q8NHS1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16■□□□□ 0.15
CLDND2Q8NHS1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC16■□□□□ 0.15
CLDND2Q8NHS1 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16■□□□□ 0.15
CLDND2Q8NHS1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDND2Q8NHS1 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC16■□□□□ 0.15
CLDND2Q8NHS1 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDND2Q8NHS1 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CLDND2Q8NHS1 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
CLDND2Q8NHS1 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16■□□□□ 0.15
CLDND2Q8NHS1 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
CLDND2Q8NHS1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16■□□□□ 0.15
CLDND2Q8NHS1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC16■□□□□ 0.15
CLDND2Q8NHS1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDND2Q8NHS1 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC16■□□□□ 0.15
CLDND2Q8NHS1 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16■□□□□ 0.15
CLDND2Q8NHS1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDND2Q8NHS1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
CLDND2Q8NHS1 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC16■□□□□ 0.15
CLDND2Q8NHS1 AK4P3-201ENST00000418260 669 ntBASIC16■□□□□ 0.15
CLDND2Q8NHS1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC16■□□□□ 0.15
CLDND2Q8NHS1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16■□□□□ 0.15
CLDND2Q8NHS1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC16■□□□□ 0.15
CLDND2Q8NHS1 RNF146-204ENST00000476956 884 ntTSL 2 BASIC16■□□□□ 0.15
CLDND2Q8NHS1 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC16■□□□□ 0.15
CLDND2Q8NHS1 TPM1-226ENST00000560959 925 ntTSL 2 BASIC16■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms