Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 CYP2T1P-201ENST00000432607 1285 ntBASIC16.28■□□□□ 0.2
BEST4Q8NFU0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 DUX4L16-201ENST00000555130 1264 ntBASIC16.28■□□□□ 0.2
BEST4Q8NFU0 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
BEST4Q8NFU0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 HACD1-201ENST00000326961 773 ntTSL 2 BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 ZNRF2P3-201ENST00000424200 374 ntBASIC16.27■□□□□ 0.2
BEST4Q8NFU0 AC034268.1-201ENST00000441047 882 ntBASIC16.27■□□□□ 0.2
BEST4Q8NFU0 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.27■□□□□ 0.2
BEST4Q8NFU0 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.27■□□□□ 0.19
BEST4Q8NFU0 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC16.27■□□□□ 0.19
BEST4Q8NFU0 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BEST4Q8NFU0 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
BEST4Q8NFU0 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BEST4Q8NFU0 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
BEST4Q8NFU0 AC124067.4-201ENST00000519691 2379 ntBASIC16.27■□□□□ 0.19
BEST4Q8NFU0 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.27■□□□□ 0.19
BEST4Q8NFU0 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.27■□□□□ 0.19
BEST4Q8NFU0 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC16.27■□□□□ 0.19
BEST4Q8NFU0 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
BEST4Q8NFU0 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 TFP1-202ENST00000475455 1573 ntBASIC16.26■□□□□ 0.19
BEST4Q8NFU0 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 LINC00896-202ENST00000609602 2128 ntBASIC16.26■□□□□ 0.19
BEST4Q8NFU0 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.26■□□□□ 0.19
BEST4Q8NFU0 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms