Protein–RNA interactions for Protein: Q8NB14

USP38, Ubiquitin carboxyl-terminal hydrolase 38, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP38Q8NB14 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP38Q8NB14 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
USP38Q8NB14 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC21.05■□□□□ 0.96
USP38Q8NB14 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
USP38Q8NB14 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.04■□□□□ 0.96
USP38Q8NB14 KRT8P10-201ENST00000450021 1447 ntBASIC21.04■□□□□ 0.96
USP38Q8NB14 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC21.04■□□□□ 0.96
USP38Q8NB14 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP38Q8NB14 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP38Q8NB14 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP38Q8NB14 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP38Q8NB14 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP38Q8NB14 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP38Q8NB14 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP38Q8NB14 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP38Q8NB14 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP38Q8NB14 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.04■□□□□ 0.96
USP38Q8NB14 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP38Q8NB14 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
USP38Q8NB14 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC21.04■□□□□ 0.96
USP38Q8NB14 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
USP38Q8NB14 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.04■□□□□ 0.96
USP38Q8NB14 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.03■□□□□ 0.96
USP38Q8NB14 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC21.03■□□□□ 0.96
USP38Q8NB14 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC21.03■□□□□ 0.96
USP38Q8NB14 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP38Q8NB14 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
USP38Q8NB14 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP38Q8NB14 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP38Q8NB14 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC21.03■□□□□ 0.96
USP38Q8NB14 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC21.03■□□□□ 0.96
USP38Q8NB14 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC21.03■□□□□ 0.96
USP38Q8NB14 AC140113.3-201ENST00000605663 199 ntBASIC21.03■□□□□ 0.96
USP38Q8NB14 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC21.03■□□□□ 0.96
USP38Q8NB14 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP38Q8NB14 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP38Q8NB14 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC21.03■□□□□ 0.96
USP38Q8NB14 KRT8P45-201ENST00000414328 1447 ntBASIC21.03■□□□□ 0.96
USP38Q8NB14 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP38Q8NB14 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.03■□□□□ 0.96
USP38Q8NB14 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.03■□□□□ 0.96
USP38Q8NB14 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
USP38Q8NB14 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP38Q8NB14 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP38Q8NB14 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP38Q8NB14 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
USP38Q8NB14 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP38Q8NB14 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP38Q8NB14 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC21.02■□□□□ 0.96
USP38Q8NB14 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC21.02■□□□□ 0.96
USP38Q8NB14 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC21.02■□□□□ 0.96
USP38Q8NB14 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP38Q8NB14 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP38Q8NB14 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP38Q8NB14 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
USP38Q8NB14 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP38Q8NB14 AP000523.1-201ENST00000398242 1049 ntBASIC21.02■□□□□ 0.96
USP38Q8NB14 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC21.02■□□□□ 0.96
USP38Q8NB14 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC21.02■□□□□ 0.96
USP38Q8NB14 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP38Q8NB14 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC21.02■□□□□ 0.96
USP38Q8NB14 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP38Q8NB14 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC21.02■□□□□ 0.96
USP38Q8NB14 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
USP38Q8NB14 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP38Q8NB14 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.02■□□□□ 0.96
USP38Q8NB14 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
USP38Q8NB14 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP38Q8NB14 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.02■□□□□ 0.96
USP38Q8NB14 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
USP38Q8NB14 KRT8P11-201ENST00000409686 1436 ntBASIC21.02■□□□□ 0.96
USP38Q8NB14 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.95
USP38Q8NB14 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
USP38Q8NB14 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC21.02■□□□□ 0.95
USP38Q8NB14 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
USP38Q8NB14 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
USP38Q8NB14 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP38Q8NB14 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP38Q8NB14 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP38Q8NB14 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
USP38Q8NB14 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
USP38Q8NB14 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP38Q8NB14 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP38Q8NB14 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP38Q8NB14 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP38Q8NB14 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC21.01■□□□□ 0.95
USP38Q8NB14 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
USP38Q8NB14 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP38Q8NB14 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
USP38Q8NB14 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP38Q8NB14 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC21.01■□□□□ 0.95
USP38Q8NB14 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP38Q8NB14 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP38Q8NB14 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.01■□□□□ 0.95
USP38Q8NB14 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.01■□□□□ 0.95
USP38Q8NB14 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP38Q8NB14 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
USP38Q8NB14 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
USP38Q8NB14 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
USP38Q8NB14 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms