Protein–RNA interactions for Protein: Q8NAE3

LINC01555, Putative uncharacterized protein encoded by LINC01555, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01555Q8NAE3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 KRT18P21-201ENST00000515767 1272 ntBASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 WWOX-216ENST00000569818 525 ntBASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 RN7SL850P-201ENST00000579959 291 ntBASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.14■□□□□ 0.49
LINC01555Q8NAE3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 MTMR9LP-203ENST00000426597 1545 ntBASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 NFYC-AS1-201ENST00000606277 1687 ntBASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 LIN28AP1-201ENST00000429574 405 ntBASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 ATP5G1P1-201ENST00000448724 379 ntBASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 CFL2-205ENST00000555765 632 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 MIR3180-5-201ENST00000583743 153 ntBASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 AC092865.7-201ENST00000641832 219 ntBASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 AC018445.3-201ENST00000624177 1945 ntBASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
LINC01555Q8NAE3 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 FAM210CP-201ENST00000445714 574 ntBASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 RBM42-202ENST00000586618 771 ntTSL 3 BASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 AC141257.4-201ENST00000634557 245 ntBASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 AC136944.6-201ENST00000634818 245 ntBASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.12■□□□□ 0.49
LINC01555Q8NAE3 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 ENSA-205ENST00000361532 792 ntTSL 2 BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 CD70-202ENST00000423145 881 ntTSL 2 BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 AL512604.3-201ENST00000569583 964 ntBASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
LINC01555Q8NAE3 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms