Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
NPAS3Q8IXF0 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPAS3Q8IXF0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
NPAS3Q8IXF0 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.52■□□□□ 0.71
NPAS3Q8IXF0 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
NPAS3Q8IXF0 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 AL845331.1-201ENST00000424978 1190 ntBASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 UNC93B7-201ENST00000509439 705 ntBASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 KLK8-205ENST00000593490 267 ntTSL 3 BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
NPAS3Q8IXF0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS3Q8IXF0 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.5■□□□□ 0.71
NPAS3Q8IXF0 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.5■□□□□ 0.71
NPAS3Q8IXF0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.5■□□□□ 0.71
NPAS3Q8IXF0 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.5■□□□□ 0.71
NPAS3Q8IXF0 AC004870.1-201ENST00000315132 882 ntBASIC19.5■□□□□ 0.71
NPAS3Q8IXF0 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.5■□□□□ 0.71
NPAS3Q8IXF0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.5■□□□□ 0.71
NPAS3Q8IXF0 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
NPAS3Q8IXF0 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS3Q8IXF0 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS3Q8IXF0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
NPAS3Q8IXF0 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS3Q8IXF0 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.5■□□□□ 0.71
NPAS3Q8IXF0 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC19.5■□□□□ 0.71
NPAS3Q8IXF0 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC19.5■□□□□ 0.71
NPAS3Q8IXF0 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 TSPY22P-201ENST00000427496 604 ntBASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 NUS1P1-201ENST00000446295 882 ntBASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 IL11-204ENST00000590625 1028 ntTSL 2 BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 AL109659.2-201ENST00000606809 1674 ntBASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.49■□□□□ 0.71
NPAS3Q8IXF0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS3Q8IXF0 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS3Q8IXF0 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.48■□□□□ 0.71
NPAS3Q8IXF0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.48■□□□□ 0.71
NPAS3Q8IXF0 Z82202.1-201ENST00000623446 1880 ntBASIC19.48■□□□□ 0.71
NPAS3Q8IXF0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
NPAS3Q8IXF0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.48■□□□□ 0.71
NPAS3Q8IXF0 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
NPAS3Q8IXF0 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC19.48■□□□□ 0.71
NPAS3Q8IXF0 FDX1P1-201ENST00000449115 551 ntBASIC19.48■□□□□ 0.71
NPAS3Q8IXF0 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC19.48■□□□□ 0.71
NPAS3Q8IXF0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.48■□□□□ 0.71
NPAS3Q8IXF0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.48■□□□□ 0.71
NPAS3Q8IXF0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC19.48■□□□□ 0.71
NPAS3Q8IXF0 MPI-205ENST00000562606 1052 ntTSL 3 BASIC19.48■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 18.9 ms