Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
LYSMD2Q8IV50 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.58■□□□□ 0.24
LYSMD2Q8IV50 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.58■□□□□ 0.24
LYSMD2Q8IV50 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LYSMD2Q8IV50 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LYSMD2Q8IV50 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
LYSMD2Q8IV50 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
LYSMD2Q8IV50 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
LYSMD2Q8IV50 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.58■□□□□ 0.24
LYSMD2Q8IV50 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC16.58■□□□□ 0.24
LYSMD2Q8IV50 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LYSMD2Q8IV50 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
LYSMD2Q8IV50 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
LYSMD2Q8IV50 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
LYSMD2Q8IV50 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
LYSMD2Q8IV50 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 ZNF815P-204ENST00000434898 1737 ntBASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 CYP21A1P-202ENST00000354927 1481 ntBASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 AC027612.3-201ENST00000413684 1047 ntBASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 TESC-206ENST00000541210 936 ntTSL 3 BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 AL031963.3-201ENST00000606441 850 ntBASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 AC083906.6-201ENST00000641366 219 ntBASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
LYSMD2Q8IV50 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 LINC02228-203ENST00000641970 1355 ntBASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.56■□□□□ 0.24
LYSMD2Q8IV50 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD2Q8IV50 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.55■□□□□ 0.24
LYSMD2Q8IV50 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD2Q8IV50 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC16.55■□□□□ 0.24
LYSMD2Q8IV50 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD2Q8IV50 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.55■□□□□ 0.24
LYSMD2Q8IV50 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD2Q8IV50 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC16.55■□□□□ 0.24
LYSMD2Q8IV50 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD2Q8IV50 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD2Q8IV50 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD2Q8IV50 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
LYSMD2Q8IV50 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms