Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRC28Q86X40 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC28Q86X40 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRC28Q86X40 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRC28Q86X40 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC28Q86X40 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC28Q86X40 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC28Q86X40 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LRRC28Q86X40 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC28Q86X40 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC28Q86X40 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC28Q86X40 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC28Q86X40 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRRC28Q86X40 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC28Q86X40 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC28Q86X40 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRRC28Q86X40 HLA-G-202ENST00000376815 851 ntBASIC16.78■□□□□ 0.28
LRRC28Q86X40 HLA-G-203ENST00000376818 1127 ntBASIC16.78■□□□□ 0.28
LRRC28Q86X40 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
LRRC28Q86X40 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
LRRC28Q86X40 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.78■□□□□ 0.28
LRRC28Q86X40 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC28Q86X40 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC28Q86X40 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC28Q86X40 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
LRRC28Q86X40 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC28Q86X40 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC28Q86X40 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC28Q86X40 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC28Q86X40 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRRC28Q86X40 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC28Q86X40 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC28Q86X40 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRC28Q86X40 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.78■□□□□ 0.28
LRRC28Q86X40 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRC28Q86X40 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC28Q86X40 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC28Q86X40 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC28Q86X40 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRC28Q86X40 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC28Q86X40 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC28Q86X40 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC28Q86X40 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC28Q86X40 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRC28Q86X40 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
LRRC28Q86X40 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC28Q86X40 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRC28Q86X40 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRC28Q86X40 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC16.77■□□□□ 0.28
LRRC28Q86X40 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRC28Q86X40 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.77■□□□□ 0.28
LRRC28Q86X40 RN7SL471P-201ENST00000580476 299 ntBASIC16.77■□□□□ 0.28
LRRC28Q86X40 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.77■□□□□ 0.28
LRRC28Q86X40 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRC28Q86X40 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRC28Q86X40 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRC28Q86X40 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.77■□□□□ 0.27
LRRC28Q86X40 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRC28Q86X40 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRRC28Q86X40 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.77■□□□□ 0.27
LRRC28Q86X40 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.77■□□□□ 0.27
LRRC28Q86X40 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRC28Q86X40 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
LRRC28Q86X40 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRRC28Q86X40 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC28Q86X40 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC28Q86X40 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LRRC28Q86X40 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LRRC28Q86X40 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LRRC28Q86X40 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC28Q86X40 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC16.76■□□□□ 0.27
LRRC28Q86X40 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRC28Q86X40 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC16.76■□□□□ 0.27
LRRC28Q86X40 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
LRRC28Q86X40 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC28Q86X40 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC28Q86X40 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC28Q86X40 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC28Q86X40 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.76■□□□□ 0.27
LRRC28Q86X40 IRX1P1-201ENST00000438849 1838 ntBASIC16.76■□□□□ 0.27
LRRC28Q86X40 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC28Q86X40 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC28Q86X40 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRC28Q86X40 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC16.76■□□□□ 0.27
LRRC28Q86X40 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRC28Q86X40 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRC28Q86X40 AC069544.1-201ENST00000609399 999 ntBASIC16.76■□□□□ 0.27
LRRC28Q86X40 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC16.76■□□□□ 0.27
LRRC28Q86X40 AC067852.2-201ENST00000590513 2313 ntBASIC16.76■□□□□ 0.27
LRRC28Q86X40 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC28Q86X40 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC28Q86X40 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC28Q86X40 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
LRRC28Q86X40 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC28Q86X40 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC28Q86X40 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRC28Q86X40 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LRRC28Q86X40 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.75■□□□□ 0.27
LRRC28Q86X40 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRRC28Q86X40 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms