Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 SLC29A4P2-201ENST00000504749 1089 ntBASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 HEIH-201ENST00000623091 1652 ntBASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
LRRTM1Q86UE6 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 AC092368.3-202ENST00000574180 1591 ntBASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 AL162430.1-201ENST00000480705 870 ntBASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 RHOD-202ENST00000532559 538 ntTSL 3 BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 OAS3-207ENST00000551007 998 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 AC022517.1-201ENST00000592429 346 ntBASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 AC080038.1-201ENST00000611274 1154 ntBASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 AC092118.2-201ENST00000613495 667 ntBASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 AC120498.8-201ENST00000614275 531 ntBASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
LRRTM1Q86UE6 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 CDCA4P2-201ENST00000441182 718 ntBASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 REXO2-208ENST00000539754 791 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
LRRTM1Q86UE6 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms