Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 RPS2P55-201ENST00000397318 883 ntBASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 AC107956.1-201ENST00000494359 873 ntBASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 CKBP1-201ENST00000565489 1086 ntBASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
ZNF549Q6P9A3 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 FAM207BP-201ENST00000447172 505 ntBASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 AC113410.3-201ENST00000623366 203 ntBASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.71■□□□□ 0.59
ZNF549Q6P9A3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
ZNF549Q6P9A3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
ZNF549Q6P9A3 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.71■□□□□ 0.58
ZNF549Q6P9A3 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 HEIH-201ENST00000623091 1652 ntBASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 KRT8P3-201ENST00000519669 1449 ntBASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 AC068587.9-201ENST00000641814 219 ntBASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
ZNF549Q6P9A3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 AC116562.2-201ENST00000507042 360 ntBASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 AC233702.5-201ENST00000584107 538 ntBASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 Z99916.2-201ENST00000604037 246 ntBASIC18.69■□□□□ 0.58
ZNF549Q6P9A3 AP000692.2-201ENST00000608391 879 ntBASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms