Protein–RNA interactions for Protein: Q6IMN6

CAPRIN2, Caprin-2, humanhuman

Known RBP Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN2Q6IMN6 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
CAPRIN2Q6IMN6 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPRIN2Q6IMN6 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.1■□□□□ 0.65
CAPRIN2Q6IMN6 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.1■□□□□ 0.65
CAPRIN2Q6IMN6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CAPRIN2Q6IMN6 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC19.1■□□□□ 0.65
CAPRIN2Q6IMN6 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
CAPRIN2Q6IMN6 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPRIN2Q6IMN6 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPRIN2Q6IMN6 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC19.1■□□□□ 0.65
CAPRIN2Q6IMN6 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPRIN2Q6IMN6 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
CAPRIN2Q6IMN6 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 MIR718-201ENST00000390190 70 ntBASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 AL353807.1-201ENST00000427475 662 ntBASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 AF186192.3-201ENST00000583427 947 ntBASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 AL353708.3-201ENST00000610272 989 ntBASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
CAPRIN2Q6IMN6 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
CAPRIN2Q6IMN6 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
CAPRIN2Q6IMN6 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC19.08■□□□□ 0.65
CAPRIN2Q6IMN6 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.65
CAPRIN2Q6IMN6 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.65
CAPRIN2Q6IMN6 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC19.08■□□□□ 0.65
CAPRIN2Q6IMN6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
CAPRIN2Q6IMN6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.08■□□□□ 0.64
CAPRIN2Q6IMN6 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.08■□□□□ 0.64
CAPRIN2Q6IMN6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.08■□□□□ 0.64
CAPRIN2Q6IMN6 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
CAPRIN2Q6IMN6 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPRIN2Q6IMN6 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CAPRIN2Q6IMN6 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.08■□□□□ 0.64
CAPRIN2Q6IMN6 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.08■□□□□ 0.64
CAPRIN2Q6IMN6 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
CAPRIN2Q6IMN6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPRIN2Q6IMN6 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPRIN2Q6IMN6 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.08■□□□□ 0.64
CAPRIN2Q6IMN6 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPRIN2Q6IMN6 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.08■□□□□ 0.64
CAPRIN2Q6IMN6 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.08■□□□□ 0.64
CAPRIN2Q6IMN6 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
CAPRIN2Q6IMN6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 ECEL1P3-201ENST00000427961 737 ntBASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 NME1-207ENST00000480143 964 ntTSL 2 BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 AC073912.3-201ENST00000624414 853 ntBASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CAPRIN2Q6IMN6 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CAPRIN2Q6IMN6 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CAPRIN2Q6IMN6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPRIN2Q6IMN6 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPRIN2Q6IMN6 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CAPRIN2Q6IMN6 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms