Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
COL13A1Q5TAT6 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.2■□□□□ 0.98
COL13A1Q5TAT6 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.2■□□□□ 0.98
COL13A1Q5TAT6 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
COL13A1Q5TAT6 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL13A1Q5TAT6 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC21.19■□□□□ 0.98
COL13A1Q5TAT6 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC21.19■□□□□ 0.98
COL13A1Q5TAT6 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL13A1Q5TAT6 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL13A1Q5TAT6 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL13A1Q5TAT6 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
COL13A1Q5TAT6 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
COL13A1Q5TAT6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC21.19■□□□□ 0.98
COL13A1Q5TAT6 AL031432.2-201ENST00000566714 459 ntBASIC21.19■□□□□ 0.98
COL13A1Q5TAT6 AL928711.1-201ENST00000570165 459 ntBASIC21.19■□□□□ 0.98
COL13A1Q5TAT6 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.19■□□□□ 0.98
COL13A1Q5TAT6 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.19■□□□□ 0.98
COL13A1Q5TAT6 AL353692.3-201ENST00000407031 1396 ntBASIC21.19■□□□□ 0.98
COL13A1Q5TAT6 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL13A1Q5TAT6 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL13A1Q5TAT6 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
COL13A1Q5TAT6 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
COL13A1Q5TAT6 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
COL13A1Q5TAT6 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL13A1Q5TAT6 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC21.18■□□□□ 0.98
COL13A1Q5TAT6 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21.18■□□□□ 0.98
COL13A1Q5TAT6 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL13A1Q5TAT6 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL13A1Q5TAT6 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC21.18■□□□□ 0.98
COL13A1Q5TAT6 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC21.18■□□□□ 0.98
COL13A1Q5TAT6 AC004945.1-201ENST00000416738 983 ntBASIC21.18■□□□□ 0.98
COL13A1Q5TAT6 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC21.18■□□□□ 0.98
COL13A1Q5TAT6 PUS1-205ENST00000535067 838 ntTSL 3 BASIC21.18■□□□□ 0.98
COL13A1Q5TAT6 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL13A1Q5TAT6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC21.18■□□□□ 0.98
COL13A1Q5TAT6 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC21.18■□□□□ 0.98
COL13A1Q5TAT6 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL13A1Q5TAT6 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.18■□□□□ 0.98
COL13A1Q5TAT6 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL13A1Q5TAT6 AP005117.1-201ENST00000584346 1413 ntBASIC21.18■□□□□ 0.98
COL13A1Q5TAT6 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC21.18■□□□□ 0.98
COL13A1Q5TAT6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
COL13A1Q5TAT6 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
COL13A1Q5TAT6 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.18■□□□□ 0.98
COL13A1Q5TAT6 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC21.18■□□□□ 0.98
COL13A1Q5TAT6 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL13A1Q5TAT6 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.17■□□□□ 0.98
COL13A1Q5TAT6 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.17■□□□□ 0.98
COL13A1Q5TAT6 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC21.17■□□□□ 0.98
COL13A1Q5TAT6 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC21.17■□□□□ 0.98
COL13A1Q5TAT6 AC025678.2-201ENST00000562061 970 ntBASIC21.17■□□□□ 0.98
COL13A1Q5TAT6 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC21.17■□□□□ 0.98
COL13A1Q5TAT6 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC21.17■□□□□ 0.98
COL13A1Q5TAT6 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC21.17■□□□□ 0.98
COL13A1Q5TAT6 AC097374.2-201ENST00000618617 1306 ntBASIC21.17■□□□□ 0.98
COL13A1Q5TAT6 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC21.17■□□□□ 0.98
COL13A1Q5TAT6 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL13A1Q5TAT6 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
COL13A1Q5TAT6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL13A1Q5TAT6 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
COL13A1Q5TAT6 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
COL13A1Q5TAT6 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL13A1Q5TAT6 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL13A1Q5TAT6 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC21.16■□□□□ 0.98
COL13A1Q5TAT6 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
COL13A1Q5TAT6 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL13A1Q5TAT6 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
COL13A1Q5TAT6 TP73-AS1-210ENST00000637775 1455 ntBASIC21.16■□□□□ 0.98
COL13A1Q5TAT6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC21.16■□□□□ 0.98
COL13A1Q5TAT6 ARSEP1-201ENST00000420443 635 ntBASIC21.16■□□□□ 0.98
COL13A1Q5TAT6 TSPY16P-201ENST00000449843 468 ntBASIC21.16■□□□□ 0.98
COL13A1Q5TAT6 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC21.16■□□□□ 0.98
COL13A1Q5TAT6 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC21.16■□□□□ 0.98
COL13A1Q5TAT6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
COL13A1Q5TAT6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.16■□□□□ 0.98
COL13A1Q5TAT6 TK1-204ENST00000590430 683 ntTSL 3 BASIC21.16■□□□□ 0.98
COL13A1Q5TAT6 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC21.16■□□□□ 0.98
COL13A1Q5TAT6 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC21.16■□□□□ 0.98
COL13A1Q5TAT6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL13A1Q5TAT6 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC21.15■□□□□ 0.98
COL13A1Q5TAT6 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.15■□□□□ 0.98
COL13A1Q5TAT6 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL13A1Q5TAT6 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC21.15■□□□□ 0.98
COL13A1Q5TAT6 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL13A1Q5TAT6 MANBAL-204ENST00000397151 1503 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
COL13A1Q5TAT6 MANBAL-205ENST00000397152 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
COL13A1Q5TAT6 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL13A1Q5TAT6 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL13A1Q5TAT6 RHOC-206ENST00000369637 888 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
COL13A1Q5TAT6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
COL13A1Q5TAT6 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC21.15■□□□□ 0.98
COL13A1Q5TAT6 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.15■□□□□ 0.98
COL13A1Q5TAT6 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.98
COL13A1Q5TAT6 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL13A1Q5TAT6 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
COL13A1Q5TAT6 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL13A1Q5TAT6 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
COL13A1Q5TAT6 AL356309.3-201ENST00000624132 1934 ntBASIC21.14■□□□□ 0.98
COL13A1Q5TAT6 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
COL13A1Q5TAT6 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms