Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRK2Q5S007 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRK2Q5S007 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
LRRK2Q5S007 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRK2Q5S007 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC16.34■□□□□ 0.21
LRRK2Q5S007 AC011840.4-201ENST00000578471 627 ntBASIC16.34■□□□□ 0.21
LRRK2Q5S007 AC106028.4-201ENST00000614509 607 ntBASIC16.34■□□□□ 0.21
LRRK2Q5S007 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRK2Q5S007 AC233723.2-201ENST00000623798 2106 ntBASIC16.34■□□□□ 0.21
LRRK2Q5S007 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRK2Q5S007 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
LRRK2Q5S007 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
LRRK2Q5S007 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRK2Q5S007 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRK2Q5S007 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
LRRK2Q5S007 AC006128.1-201ENST00000624704 1661 ntBASIC16.34■□□□□ 0.21
LRRK2Q5S007 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
LRRK2Q5S007 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
LRRK2Q5S007 HIST2H3DP1-201ENST00000401004 416 ntBASIC16.34■□□□□ 0.21
LRRK2Q5S007 PNKD-204ENST00000436005 978 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRK2Q5S007 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC16.34■□□□□ 0.21
LRRK2Q5S007 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.34■□□□□ 0.21
LRRK2Q5S007 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
LRRK2Q5S007 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC16.33■□□□□ 0.21
LRRK2Q5S007 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.33■□□□□ 0.21
LRRK2Q5S007 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRK2Q5S007 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRK2Q5S007 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC16.33■□□□□ 0.2
LRRK2Q5S007 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
LRRK2Q5S007 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRK2Q5S007 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.33■□□□□ 0.2
LRRK2Q5S007 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.33■□□□□ 0.2
LRRK2Q5S007 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.33■□□□□ 0.2
LRRK2Q5S007 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRK2Q5S007 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.33■□□□□ 0.2
LRRK2Q5S007 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.33■□□□□ 0.2
LRRK2Q5S007 FEM1AP4-201ENST00000443167 1987 ntBASIC16.33■□□□□ 0.2
LRRK2Q5S007 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRK2Q5S007 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRK2Q5S007 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
LRRK2Q5S007 BID-203ENST00000399765 1879 ntTSL 2 BASIC16.33■□□□□ 0.2
LRRK2Q5S007 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC16.33■□□□□ 0.2
LRRK2Q5S007 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.33■□□□□ 0.2
LRRK2Q5S007 AC007225.1-201ENST00000566331 1836 ntBASIC16.33■□□□□ 0.2
LRRK2Q5S007 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
LRRK2Q5S007 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
LRRK2Q5S007 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.33■□□□□ 0.2
LRRK2Q5S007 GREM1-201ENST00000560677 623 ntTSL 4 BASIC16.33■□□□□ 0.2
LRRK2Q5S007 AP001269.4-201ENST00000609611 512 ntBASIC16.33■□□□□ 0.2
LRRK2Q5S007 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LRRK2Q5S007 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRK2Q5S007 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRK2Q5S007 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRK2Q5S007 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRK2Q5S007 KRT8P3-201ENST00000519669 1449 ntBASIC16.32■□□□□ 0.2
LRRK2Q5S007 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRK2Q5S007 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRK2Q5S007 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRK2Q5S007 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRK2Q5S007 TREX1-205ENST00000625293 1783 ntBASIC16.32■□□□□ 0.2
LRRK2Q5S007 ANKRD18DP-204ENST00000455355 1975 ntBASIC16.32■□□□□ 0.2
LRRK2Q5S007 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRK2Q5S007 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC16.32■□□□□ 0.2
LRRK2Q5S007 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRK2Q5S007 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRK2Q5S007 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRK2Q5S007 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LRRK2Q5S007 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
LRRK2Q5S007 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRK2Q5S007 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRK2Q5S007 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
LRRK2Q5S007 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRK2Q5S007 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
LRRK2Q5S007 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
LRRK2Q5S007 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
LRRK2Q5S007 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.32■□□□□ 0.2
LRRK2Q5S007 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
LRRK2Q5S007 AL645939.2-201ENST00000427340 991 ntBASIC16.32■□□□□ 0.2
LRRK2Q5S007 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.32■□□□□ 0.2
LRRK2Q5S007 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.32■□□□□ 0.2
LRRK2Q5S007 GPR32P1-201ENST00000601788 811 ntBASIC16.32■□□□□ 0.2
LRRK2Q5S007 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.32■□□□□ 0.2
LRRK2Q5S007 AC104417.2-201ENST00000562989 1793 ntBASIC16.31■□□□□ 0.2
LRRK2Q5S007 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRK2Q5S007 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRK2Q5S007 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRK2Q5S007 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRK2Q5S007 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRK2Q5S007 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LRRK2Q5S007 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRK2Q5S007 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRK2Q5S007 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
LRRK2Q5S007 MIR770-201ENST00000390219 98 ntBASIC16.31■□□□□ 0.2
LRRK2Q5S007 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
LRRK2Q5S007 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC16.31■□□□□ 0.2
LRRK2Q5S007 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.31■□□□□ 0.2
LRRK2Q5S007 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
LRRK2Q5S007 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
LRRK2Q5S007 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.31■□□□□ 0.2
LRRK2Q5S007 PPOX-214ENST00000535223 664 ntTSL 3 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms