Protein–RNA interactions for Protein: Q5FBB7

SGO1, Shugoshin 1, humanhuman

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGO1Q5FBB7 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SGO1Q5FBB7 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SGO1Q5FBB7 KRT8P41-201ENST00000533985 1514 ntBASIC18.33■□□□□ 0.53
SGO1Q5FBB7 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SGO1Q5FBB7 AL512353.2-201ENST00000448759 1962 ntBASIC18.33■□□□□ 0.53
SGO1Q5FBB7 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SGO1Q5FBB7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SGO1Q5FBB7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SGO1Q5FBB7 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SGO1Q5FBB7 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SGO1Q5FBB7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SGO1Q5FBB7 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SGO1Q5FBB7 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
SGO1Q5FBB7 WIZP1-201ENST00000531444 2299 ntBASIC18.33■□□□□ 0.53
SGO1Q5FBB7 AL031598.1-201ENST00000561511 1773 ntBASIC18.33■□□□□ 0.53
SGO1Q5FBB7 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.33■□□□□ 0.53
SGO1Q5FBB7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
SGO1Q5FBB7 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SGO1Q5FBB7 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SGO1Q5FBB7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SGO1Q5FBB7 POU5F1P3-201ENST00000428824 1078 ntBASIC18.33■□□□□ 0.52
SGO1Q5FBB7 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SGO1Q5FBB7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.33■□□□□ 0.52
SGO1Q5FBB7 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC18.33■□□□□ 0.52
SGO1Q5FBB7 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC18.33■□□□□ 0.52
SGO1Q5FBB7 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC18.33■□□□□ 0.52
SGO1Q5FBB7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SGO1Q5FBB7 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SGO1Q5FBB7 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
SGO1Q5FBB7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
SGO1Q5FBB7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SGO1Q5FBB7 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SGO1Q5FBB7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
SGO1Q5FBB7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
SGO1Q5FBB7 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 AC133681.1-201ENST00000465482 601 ntBASIC18.32■□□□□ 0.52
SGO1Q5FBB7 AP002982.1-201ENST00000492365 877 ntBASIC18.32■□□□□ 0.52
SGO1Q5FBB7 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 CABP2-204ENST00000636477 941 ntTSL 5 BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SGO1Q5FBB7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
SGO1Q5FBB7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SGO1Q5FBB7 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
SGO1Q5FBB7 HTR7P1-201ENST00000538670 1336 ntBASIC18.31■□□□□ 0.52
SGO1Q5FBB7 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SGO1Q5FBB7 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SGO1Q5FBB7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms