Protein–RNA interactions for Protein: Q53S48

ALF, STON1-GTF2A1L readthrough, humanhuman

Predictions only

Length 1,182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALFQ53S48 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ALFQ53S48 AL137013.1-201ENST00000432946 1228 ntBASIC19.38■□□□□ 0.69
ALFQ53S48 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
ALFQ53S48 KRT18P57-201ENST00000443599 1254 ntBASIC19.38■□□□□ 0.69
ALFQ53S48 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.38■□□□□ 0.69
ALFQ53S48 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.38■□□□□ 0.69
ALFQ53S48 KRT18P21-201ENST00000515767 1272 ntBASIC19.38■□□□□ 0.69
ALFQ53S48 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
ALFQ53S48 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
ALFQ53S48 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
ALFQ53S48 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.38■□□□□ 0.69
ALFQ53S48 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
ALFQ53S48 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ALFQ53S48 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALFQ53S48 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
ALFQ53S48 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ALFQ53S48 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.37■□□□□ 0.69
ALFQ53S48 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.37■□□□□ 0.69
ALFQ53S48 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.37■□□□□ 0.69
ALFQ53S48 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ALFQ53S48 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.37■□□□□ 0.69
ALFQ53S48 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ALFQ53S48 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
ALFQ53S48 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALFQ53S48 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALFQ53S48 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALFQ53S48 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.37■□□□□ 0.69
ALFQ53S48 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.37■□□□□ 0.69
ALFQ53S48 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
ALFQ53S48 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.37■□□□□ 0.69
ALFQ53S48 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
ALFQ53S48 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALFQ53S48 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALFQ53S48 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
ALFQ53S48 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALFQ53S48 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
ALFQ53S48 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ALFQ53S48 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALFQ53S48 RCC2P3-201ENST00000418112 1537 ntBASIC19.36■□□□□ 0.69
ALFQ53S48 KRT8P32-201ENST00000512863 1461 ntBASIC19.36■□□□□ 0.69
ALFQ53S48 RNF165-205ENST00000588679 2904 ntBASIC19.36■□□□□ 0.69
ALFQ53S48 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ALFQ53S48 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALFQ53S48 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALFQ53S48 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
ALFQ53S48 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.36■□□□□ 0.69
ALFQ53S48 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALFQ53S48 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
ALFQ53S48 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALFQ53S48 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.36■□□□□ 0.69
ALFQ53S48 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ALFQ53S48 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.36■□□□□ 0.69
ALFQ53S48 RN7SL850P-201ENST00000579959 291 ntBASIC19.36■□□□□ 0.69
ALFQ53S48 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.36■□□□□ 0.69
ALFQ53S48 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
ALFQ53S48 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
ALFQ53S48 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALFQ53S48 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALFQ53S48 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.36■□□□□ 0.69
ALFQ53S48 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
ALFQ53S48 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
ALFQ53S48 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.35■□□□□ 0.69
ALFQ53S48 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ALFQ53S48 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.35■□□□□ 0.69
ALFQ53S48 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALFQ53S48 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALFQ53S48 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALFQ53S48 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALFQ53S48 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALFQ53S48 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ALFQ53S48 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ALFQ53S48 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALFQ53S48 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.35■□□□□ 0.69
ALFQ53S48 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
ALFQ53S48 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.35■□□□□ 0.69
ALFQ53S48 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
ALFQ53S48 AL138966.2-201ENST00000621997 464 ntBASIC19.35■□□□□ 0.69
ALFQ53S48 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ALFQ53S48 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.35■□□□□ 0.69
ALFQ53S48 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ALFQ53S48 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ALFQ53S48 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.35■□□□□ 0.69
ALFQ53S48 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALFQ53S48 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALFQ53S48 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALFQ53S48 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALFQ53S48 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
ALFQ53S48 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
ALFQ53S48 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALFQ53S48 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
ALFQ53S48 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.35■□□□□ 0.69
ALFQ53S48 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
ALFQ53S48 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
ALFQ53S48 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
ALFQ53S48 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ALFQ53S48 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
ALFQ53S48 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
ALFQ53S48 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
ALFQ53S48 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.34■□□□□ 0.69
ALFQ53S48 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms