Protein–RNA interactions for Protein: Q53S08

RAB6C, Rab6C, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6CQ53S08 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB6CQ53S08 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB6CQ53S08 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB6CQ53S08 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB6CQ53S08 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB6CQ53S08 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC19.61■□□□□ 0.73
RAB6CQ53S08 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC19.61■□□□□ 0.73
RAB6CQ53S08 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RAB6CQ53S08 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB6CQ53S08 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
RAB6CQ53S08 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
RAB6CQ53S08 BX088651.1-201ENST00000540551 451 ntBASIC19.61■□□□□ 0.73
RAB6CQ53S08 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB6CQ53S08 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB6CQ53S08 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC19.61■□□□□ 0.73
RAB6CQ53S08 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB6CQ53S08 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB6CQ53S08 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB6CQ53S08 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB6CQ53S08 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB6CQ53S08 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB6CQ53S08 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
RAB6CQ53S08 AC008556.1-201ENST00000610908 2040 ntBASIC19.61■□□□□ 0.73
RAB6CQ53S08 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RAB6CQ53S08 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RAB6CQ53S08 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.61■□□□□ 0.73
RAB6CQ53S08 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
RAB6CQ53S08 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB6CQ53S08 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
RAB6CQ53S08 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB6CQ53S08 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
RAB6CQ53S08 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB6CQ53S08 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB6CQ53S08 ANO7L1-203ENST00000602586 1720 ntBASIC19.6■□□□□ 0.73
RAB6CQ53S08 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB6CQ53S08 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB6CQ53S08 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB6CQ53S08 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB6CQ53S08 AL023284.2-201ENST00000405850 579 ntBASIC19.6■□□□□ 0.73
RAB6CQ53S08 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB6CQ53S08 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB6CQ53S08 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.6■□□□□ 0.73
RAB6CQ53S08 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB6CQ53S08 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB6CQ53S08 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB6CQ53S08 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB6CQ53S08 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB6CQ53S08 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.6■□□□□ 0.73
RAB6CQ53S08 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.6■□□□□ 0.73
RAB6CQ53S08 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RAB6CQ53S08 AL138781.2-201ENST00000617896 1843 ntBASIC19.6■□□□□ 0.73
RAB6CQ53S08 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RAB6CQ53S08 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RAB6CQ53S08 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB6CQ53S08 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.59■□□□□ 0.73
RAB6CQ53S08 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB6CQ53S08 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB6CQ53S08 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB6CQ53S08 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RAB6CQ53S08 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB6CQ53S08 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB6CQ53S08 MMP23A-201ENST00000234610 1017 ntBASIC19.59■□□□□ 0.73
RAB6CQ53S08 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RAB6CQ53S08 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB6CQ53S08 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.59■□□□□ 0.73
RAB6CQ53S08 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.59■□□□□ 0.73
RAB6CQ53S08 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.59■□□□□ 0.73
RAB6CQ53S08 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RAB6CQ53S08 WIZP1-201ENST00000531444 2299 ntBASIC19.59■□□□□ 0.73
RAB6CQ53S08 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB6CQ53S08 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB6CQ53S08 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB6CQ53S08 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.59■□□□□ 0.73
RAB6CQ53S08 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.59■□□□□ 0.73
RAB6CQ53S08 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RAB6CQ53S08 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RAB6CQ53S08 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB6CQ53S08 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB6CQ53S08 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB6CQ53S08 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.73
RAB6CQ53S08 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB6CQ53S08 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB6CQ53S08 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB6CQ53S08 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.58■□□□□ 0.73
RAB6CQ53S08 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC19.58■□□□□ 0.73
RAB6CQ53S08 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
RAB6CQ53S08 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
RAB6CQ53S08 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB6CQ53S08 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RAB6CQ53S08 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC19.58■□□□□ 0.72
RAB6CQ53S08 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.58■□□□□ 0.72
RAB6CQ53S08 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.58■□□□□ 0.72
RAB6CQ53S08 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC19.58■□□□□ 0.72
RAB6CQ53S08 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB6CQ53S08 AP003041.3-201ENST00000527151 707 ntBASIC19.58■□□□□ 0.72
RAB6CQ53S08 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.58■□□□□ 0.72
RAB6CQ53S08 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC19.58■□□□□ 0.72
RAB6CQ53S08 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
RAB6CQ53S08 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.58■□□□□ 0.72
RAB6CQ53S08 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms