Protein–RNA interactions for Protein: Q494W8

CHRFAM7A, CHRNA7-FAM7A fusion protein, humanhuman

Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7AQ494W8 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 AL138781.2-201ENST00000617896 1843 ntBASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 PHGDH-210ENST00000641115 1638 ntBASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CHRFAM7AQ494W8 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 KRT18P22-201ENST00000402024 1347 ntBASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 KRT18P57-201ENST00000443599 1254 ntBASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 RBM17P1-201ENST00000453646 1190 ntBASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 AL121829.2-201ENST00000620908 328 ntBASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CHRFAM7AQ494W8 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 NAPSB-206ENST00000562112 1266 ntBASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 AC087388.1-201ENST00000571370 1112 ntBASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC16.48■□□□□ 0.23
CHRFAM7AQ494W8 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms