Protein–RNA interactions for Protein: Q2MKA7

RSPO1, R-spondin-1, humanhuman

Predicted RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO1Q2MKA7 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RSPO1Q2MKA7 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC16.35■□□□□ 0.21
RSPO1Q2MKA7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC16.34■□□□□ 0.21
RSPO1Q2MKA7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.33■□□□□ 0.21
RSPO1Q2MKA7 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.33■□□□□ 0.21
RSPO1Q2MKA7 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC16.33■□□□□ 0.21
RSPO1Q2MKA7 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RSPO1Q2MKA7 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RSPO1Q2MKA7 AC090164.3-201ENST00000610780 2143 ntBASIC16.33■□□□□ 0.21
RSPO1Q2MKA7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 RCC2P3-201ENST00000418112 1537 ntBASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
RSPO1Q2MKA7 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 MIR718-201ENST00000390190 70 ntBASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 CRYGFP-201ENST00000418459 633 ntBASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 RBM17P1-201ENST00000453646 1190 ntBASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 AC079598.2-202ENST00000546624 1451 ntBASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 AC126763.1-201ENST00000552015 2118 ntBASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 DECR2-212ENST00000627716 352 ntTSL 2 BASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.32■□□□□ 0.2
RSPO1Q2MKA7 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.31■□□□□ 0.2
RSPO1Q2MKA7 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms