Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
PDS5AQ29RF7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PDS5AQ29RF7 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC22.62■■□□□ 1.21
PDS5AQ29RF7 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC22.62■■□□□ 1.21
PDS5AQ29RF7 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PDS5AQ29RF7 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC22.62■■□□□ 1.21
PDS5AQ29RF7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDS5AQ29RF7 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PDS5AQ29RF7 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC22.61■■□□□ 1.21
PDS5AQ29RF7 AC079602.3-201ENST00000623931 403 ntBASIC22.61■■□□□ 1.21
PDS5AQ29RF7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC22.61■■□□□ 1.21
PDS5AQ29RF7 HEIH-201ENST00000623091 1652 ntBASIC22.61■■□□□ 1.21
PDS5AQ29RF7 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
PDS5AQ29RF7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC22.61■■□□□ 1.21
PDS5AQ29RF7 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PDS5AQ29RF7 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC22.61■■□□□ 1.21
PDS5AQ29RF7 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 NMU-205ENST00000511469 756 ntTSL 3 BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC22.6■■□□□ 1.21
PDS5AQ29RF7 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PDS5AQ29RF7 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDS5AQ29RF7 FXN-203ENST00000396366 922 ntTSL 2 BASIC22.59■■□□□ 1.21
PDS5AQ29RF7 AL645929.1-201ENST00000420084 975 ntBASIC22.59■■□□□ 1.21
PDS5AQ29RF7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PDS5AQ29RF7 KRT18P41-201ENST00000518924 1277 ntBASIC22.59■■□□□ 1.21
PDS5AQ29RF7 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PDS5AQ29RF7 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC22.59■■□□□ 1.21
PDS5AQ29RF7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC22.59■■□□□ 1.21
PDS5AQ29RF7 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PDS5AQ29RF7 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PDS5AQ29RF7 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC22.59■■□□□ 1.21
PDS5AQ29RF7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDS5AQ29RF7 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PDS5AQ29RF7 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
PDS5AQ29RF7 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC22.59■■□□□ 1.21
PDS5AQ29RF7 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
PDS5AQ29RF7 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
PDS5AQ29RF7 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC22.59■■□□□ 1.21
PDS5AQ29RF7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDS5AQ29RF7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC22.58■■□□□ 1.21
PDS5AQ29RF7 DMKN-212ENST00000443640 842 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
PDS5AQ29RF7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC22.58■■□□□ 1.21
PDS5AQ29RF7 AC069148.1-201ENST00000608741 768 ntBASIC22.58■■□□□ 1.21
PDS5AQ29RF7 WDR6-223ENST00000627177 207 ntTSL 2 BASIC22.58■■□□□ 1.21
PDS5AQ29RF7 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
PDS5AQ29RF7 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC22.58■■□□□ 1.21
PDS5AQ29RF7 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
PDS5AQ29RF7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC22.58■■□□□ 1.21
PDS5AQ29RF7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDS5AQ29RF7 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.21
PDS5AQ29RF7 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC22.58■■□□□ 1.21
PDS5AQ29RF7 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC22.58■■□□□ 1.21
PDS5AQ29RF7 AC006333.2-201ENST00000607957 2099 ntBASIC22.58■■□□□ 1.21
PDS5AQ29RF7 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC22.58■■□□□ 1.21
PDS5AQ29RF7 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
PDS5AQ29RF7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 MTMR9LP-203ENST00000426597 1545 ntBASIC22.57■■□□□ 1.2
PDS5AQ29RF7 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 AL136038.4-201ENST00000603606 1261 ntBASIC22.57■■□□□ 1.2
PDS5AQ29RF7 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
PDS5AQ29RF7 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms