Protein–RNA interactions for Protein: Q04323

UBXN1, UBX domain-containing protein 1, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1Q04323 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBXN1Q04323 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBXN1Q04323 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
UBXN1Q04323 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBXN1Q04323 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBXN1Q04323 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBXN1Q04323 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC20.67■□□□□ 0.9
UBXN1Q04323 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBXN1Q04323 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBXN1Q04323 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBXN1Q04323 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBXN1Q04323 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBXN1Q04323 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBXN1Q04323 GAS7-202ENST00000396115 929 ntTSL 5 BASIC20.67■□□□□ 0.9
UBXN1Q04323 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.67■□□□□ 0.9
UBXN1Q04323 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBXN1Q04323 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBXN1Q04323 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC20.67■□□□□ 0.9
UBXN1Q04323 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBXN1Q04323 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBXN1Q04323 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC20.67■□□□□ 0.9
UBXN1Q04323 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
UBXN1Q04323 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBXN1Q04323 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC20.67■□□□□ 0.9
UBXN1Q04323 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.67■□□□□ 0.9
UBXN1Q04323 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBXN1Q04323 AC005332.8-201ENST00000622750 2735 ntBASIC20.67■□□□□ 0.9
UBXN1Q04323 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBXN1Q04323 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
UBXN1Q04323 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
UBXN1Q04323 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.66■□□□□ 0.9
UBXN1Q04323 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBXN1Q04323 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBXN1Q04323 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBXN1Q04323 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.66■□□□□ 0.9
UBXN1Q04323 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBXN1Q04323 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBXN1Q04323 AC090192.1-201ENST00000517740 490 ntBASIC20.66■□□□□ 0.9
UBXN1Q04323 AP003097.1-201ENST00000530657 1135 ntBASIC20.66■□□□□ 0.9
UBXN1Q04323 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
UBXN1Q04323 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.66■□□□□ 0.9
UBXN1Q04323 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC20.66■□□□□ 0.9
UBXN1Q04323 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC20.66■□□□□ 0.9
UBXN1Q04323 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
UBXN1Q04323 MADD-208ENST00000405573 1823 ntTSL 5 BASIC20.66■□□□□ 0.9
UBXN1Q04323 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBXN1Q04323 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC20.66■□□□□ 0.9
UBXN1Q04323 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBXN1Q04323 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBXN1Q04323 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
UBXN1Q04323 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
UBXN1Q04323 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC20.66■□□□□ 0.9
UBXN1Q04323 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC20.66■□□□□ 0.9
UBXN1Q04323 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBXN1Q04323 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBXN1Q04323 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBXN1Q04323 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.65■□□□□ 0.9
UBXN1Q04323 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBXN1Q04323 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBXN1Q04323 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBXN1Q04323 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.65■□□□□ 0.9
UBXN1Q04323 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBXN1Q04323 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBXN1Q04323 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBXN1Q04323 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBXN1Q04323 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBXN1Q04323 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC20.65■□□□□ 0.9
UBXN1Q04323 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBXN1Q04323 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.65■□□□□ 0.9
UBXN1Q04323 KRT17P3-201ENST00000420566 1262 ntBASIC20.65■□□□□ 0.9
UBXN1Q04323 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC20.65■□□□□ 0.9
UBXN1Q04323 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC20.65■□□□□ 0.9
UBXN1Q04323 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC20.65■□□□□ 0.9
UBXN1Q04323 AC069544.1-201ENST00000609399 999 ntBASIC20.65■□□□□ 0.9
UBXN1Q04323 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBXN1Q04323 AL133373.2-201ENST00000623187 2828 ntBASIC20.65■□□□□ 0.9
UBXN1Q04323 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
UBXN1Q04323 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBXN1Q04323 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBXN1Q04323 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC20.65■□□□□ 0.9
UBXN1Q04323 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
UBXN1Q04323 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.65■□□□□ 0.9
UBXN1Q04323 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
UBXN1Q04323 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
UBXN1Q04323 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
UBXN1Q04323 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
UBXN1Q04323 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBXN1Q04323 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
UBXN1Q04323 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBXN1Q04323 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC20.64■□□□□ 0.89
UBXN1Q04323 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.64■□□□□ 0.89
UBXN1Q04323 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBXN1Q04323 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
UBXN1Q04323 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.64■□□□□ 0.89
UBXN1Q04323 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC20.64■□□□□ 0.89
UBXN1Q04323 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.64■□□□□ 0.89
UBXN1Q04323 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.64■□□□□ 0.89
UBXN1Q04323 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.64■□□□□ 0.89
UBXN1Q04323 AC233263.1-201ENST00000578059 224 ntBASIC20.64■□□□□ 0.89
UBXN1Q04323 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms