Protein–RNA interactions for Protein: P98179

RBM3, RNA-binding protein 3, humanhuman

Known RBP Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBM3P98179 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC11.9□□□□□ -0.5
RBM3P98179 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
RBM3P98179 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RBM3P98179 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
RBM3P98179 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC11.9□□□□□ -0.5
RBM3P98179 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RBM3P98179 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC11.9□□□□□ -0.5
RBM3P98179 AC126763.1-201ENST00000552015 2118 ntBASIC11.9□□□□□ -0.5
RBM3P98179 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
RBM3P98179 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RBM3P98179 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
RBM3P98179 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RBM3P98179 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC11.9□□□□□ -0.5
RBM3P98179 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC11.9□□□□□ -0.5
RBM3P98179 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC11.9□□□□□ -0.5
RBM3P98179 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
RBM3P98179 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RBM3P98179 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
RBM3P98179 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC11.9□□□□□ -0.5
RBM3P98179 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RBM3P98179 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC11.9□□□□□ -0.5
RBM3P98179 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RBM3P98179 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC11.9□□□□□ -0.5
RBM3P98179 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC11.9□□□□□ -0.5
RBM3P98179 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC11.9□□□□□ -0.5
RBM3P98179 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC11.9□□□□□ -0.5
RBM3P98179 DUX4L19-201ENST00000557448 1267 ntBASIC11.9□□□□□ -0.5
RBM3P98179 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RBM3P98179 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
RBM3P98179 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RBM3P98179 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RBM3P98179 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RBM3P98179 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC11.9□□□□□ -0.5
RBM3P98179 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC11.9□□□□□ -0.5
RBM3P98179 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RBM3P98179 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RBM3P98179 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC11.9□□□□□ -0.5
RBM3P98179 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.5
RBM3P98179 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
RBM3P98179 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
RBM3P98179 BCL9L-201ENST00000334801 10005 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
RBM3P98179 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC11.9□□□□□ -0.51
RBM3P98179 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.51
RBM3P98179 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.51
RBM3P98179 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC11.9□□□□□ -0.51
RBM3P98179 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
RBM3P98179 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC11.89□□□□□ -0.51
RBM3P98179 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC11.89□□□□□ -0.51
RBM3P98179 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC11.89□□□□□ -0.51
RBM3P98179 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC11.89□□□□□ -0.51
RBM3P98179 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
RBM3P98179 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
RBM3P98179 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC11.89□□□□□ -0.51
RBM3P98179 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
RBM3P98179 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC11.89□□□□□ -0.51
RBM3P98179 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC11.89□□□□□ -0.51
RBM3P98179 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC11.89□□□□□ -0.51
RBM3P98179 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC11.89□□□□□ -0.51
RBM3P98179 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC11.89□□□□□ -0.51
RBM3P98179 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 HIPK3-201ENST00000303296 7408 ntTSL 5 BASIC11.89□□□□□ -0.51
RBM3P98179 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC11.89□□□□□ -0.51
RBM3P98179 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
RBM3P98179 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC11.89□□□□□ -0.51
RBM3P98179 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
RBM3P98179 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 STK24-203ENST00000397517 4578 ntTSL 2 BASIC11.89□□□□□ -0.51
RBM3P98179 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC11.89□□□□□ -0.51
RBM3P98179 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
RBM3P98179 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
RBM3P98179 CEP83-AS1-201ENST00000623122 2482 ntBASIC11.88□□□□□ -0.51
RBM3P98179 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC11.88□□□□□ -0.51
RBM3P98179 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
RBM3P98179 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
RBM3P98179 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms