Protein–RNA interactions for Protein: P78539

SRPX, Sushi repeat-containing protein SRPX, humanhuman

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPXP78539 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRPXP78539 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRPXP78539 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
SRPXP78539 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC15.56■□□□□ 0.08
SRPXP78539 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRPXP78539 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRPXP78539 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRPXP78539 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRPXP78539 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.56■□□□□ 0.08
SRPXP78539 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SRPXP78539 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
SRPXP78539 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SRPXP78539 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
SRPXP78539 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.55■□□□□ 0.08
SRPXP78539 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC15.55■□□□□ 0.08
SRPXP78539 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.55■□□□□ 0.08
SRPXP78539 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC15.55■□□□□ 0.08
SRPXP78539 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 CRK-204ENST00000574295 1391 ntTSL 5 BASIC15.55■□□□□ 0.08
SRPXP78539 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SRPXP78539 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
SRPXP78539 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC15.55■□□□□ 0.08
SRPXP78539 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SRPXP78539 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC15.55■□□□□ 0.08
SRPXP78539 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC15.55■□□□□ 0.08
SRPXP78539 MYC-208ENST00000641036 567 ntBASIC15.55■□□□□ 0.08
SRPXP78539 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.55■□□□□ 0.08
SRPXP78539 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SRPXP78539 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC15.55■□□□□ 0.08
SRPXP78539 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRPXP78539 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC15.54■□□□□ 0.08
SRPXP78539 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRPXP78539 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRPXP78539 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRPXP78539 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRPXP78539 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRPXP78539 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRPXP78539 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRPXP78539 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRPXP78539 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC15.54■□□□□ 0.08
SRPXP78539 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC15.54■□□□□ 0.08
SRPXP78539 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRPXP78539 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC15.54■□□□□ 0.08
SRPXP78539 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRPXP78539 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SRPXP78539 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC15.54■□□□□ 0.08
SRPXP78539 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC15.54■□□□□ 0.08
SRPXP78539 AC008764.6-201ENST00000595909 2069 ntBASIC15.54■□□□□ 0.08
SRPXP78539 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.54■□□□□ 0.08
SRPXP78539 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRPXP78539 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SRPXP78539 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC15.54■□□□□ 0.08
SRPXP78539 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
SRPXP78539 AC126763.1-201ENST00000552015 2118 ntBASIC15.53■□□□□ 0.08
SRPXP78539 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SRPXP78539 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC15.53■□□□□ 0.08
SRPXP78539 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SRPXP78539 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
SRPXP78539 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SRPXP78539 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SRPXP78539 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRPXP78539 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SRPXP78539 GNAS-203ENST00000306120 1878 ntBASIC15.53■□□□□ 0.08
SRPXP78539 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRPXP78539 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRPXP78539 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC15.53■□□□□ 0.08
SRPXP78539 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC15.53■□□□□ 0.08
SRPXP78539 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC15.53■□□□□ 0.08
SRPXP78539 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRPXP78539 AC005181.1-201ENST00000604782 1256 ntBASIC15.53■□□□□ 0.08
SRPXP78539 AC011767.1-201ENST00000617410 1153 ntBASIC15.53■□□□□ 0.08
SRPXP78539 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SRPXP78539 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
SRPXP78539 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
SRPXP78539 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms