Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNA1P78396 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNA1P78396 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNA1P78396 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21.44■■□□□ 1.02
CCNA1P78396 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CCNA1P78396 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CCNA1P78396 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC21.44■■□□□ 1.02
CCNA1P78396 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCNA1P78396 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNA1P78396 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNA1P78396 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.43■■□□□ 1.02
CCNA1P78396 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNA1P78396 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
CCNA1P78396 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.43■■□□□ 1.02
CCNA1P78396 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.43■■□□□ 1.02
CCNA1P78396 TOB2P1-201ENST00000469761 992 ntBASIC21.43■■□□□ 1.02
CCNA1P78396 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC21.43■■□□□ 1.02
CCNA1P78396 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
CCNA1P78396 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.43■■□□□ 1.02
CCNA1P78396 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNA1P78396 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCNA1P78396 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
CCNA1P78396 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC21.43■■□□□ 1.02
CCNA1P78396 Z83836.1-201ENST00000624605 1642 ntBASIC21.43■■□□□ 1.02
CCNA1P78396 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC21.43■■□□□ 1.02
CCNA1P78396 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
CCNA1P78396 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCNA1P78396 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC21.42■■□□□ 1.02
CCNA1P78396 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC21.42■■□□□ 1.02
CCNA1P78396 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCNA1P78396 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21.42■■□□□ 1.02
CCNA1P78396 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC21.42■■□□□ 1.02
CCNA1P78396 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCNA1P78396 AP003733.1-201ENST00000491725 852 ntBASIC21.42■■□□□ 1.02
CCNA1P78396 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC21.42■■□□□ 1.02
CCNA1P78396 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC21.42■■□□□ 1.02
CCNA1P78396 AL732292.2-201ENST00000609649 430 ntBASIC21.42■■□□□ 1.02
CCNA1P78396 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
CCNA1P78396 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNA1P78396 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC21.41■■□□□ 1.02
CCNA1P78396 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNA1P78396 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNA1P78396 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC21.41■■□□□ 1.02
CCNA1P78396 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC21.41■■□□□ 1.02
CCNA1P78396 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCNA1P78396 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNA1P78396 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNA1P78396 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC21.41■■□□□ 1.02
CCNA1P78396 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCNA1P78396 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC21.41■■□□□ 1.02
CCNA1P78396 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CCNA1P78396 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNA1P78396 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNA1P78396 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CCNA1P78396 MIR564-202ENST00000385049 94 ntBASIC21.41■■□□□ 1.02
CCNA1P78396 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC21.41■■□□□ 1.02
CCNA1P78396 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC21.41■■□□□ 1.02
CCNA1P78396 ELP6-205ENST00000439305 880 ntTSL 2 BASIC21.41■■□□□ 1.02
CCNA1P78396 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC21.41■■□□□ 1.02
CCNA1P78396 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC21.41■■□□□ 1.02
CCNA1P78396 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
CCNA1P78396 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC21.41■■□□□ 1.02
CCNA1P78396 MIR3180-4-201ENST00000582223 153 ntBASIC21.41■■□□□ 1.02
CCNA1P78396 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CCNA1P78396 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
CCNA1P78396 TP73-202ENST00000354437 2140 ntTSL 5 BASIC21.41■■□□□ 1.02
CCNA1P78396 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CCNA1P78396 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC21.4■■□□□ 1.02
CCNA1P78396 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC21.4■■□□□ 1.02
CCNA1P78396 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC21.4■■□□□ 1.02
CCNA1P78396 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNA1P78396 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNA1P78396 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNA1P78396 UBC-206ENST00000538617 1303 ntTSL 5 BASIC21.4■■□□□ 1.02
CCNA1P78396 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CCNA1P78396 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC21.4■■□□□ 1.02
CCNA1P78396 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CCNA1P78396 PVRIG2P-201ENST00000435460 978 ntBASIC21.4■■□□□ 1.02
CCNA1P78396 EMBP1-201ENST00000458200 901 ntBASIC21.4■■□□□ 1.02
CCNA1P78396 AC104819.1-201ENST00000504587 486 ntBASIC21.4■■□□□ 1.02
CCNA1P78396 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC21.4■■□□□ 1.02
CCNA1P78396 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC21.4■■□□□ 1.02
CCNA1P78396 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CCNA1P78396 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC21.4■■□□□ 1.02
CCNA1P78396 AC005332.3-201ENST00000589904 676 ntBASIC21.4■■□□□ 1.02
CCNA1P78396 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC21.4■■□□□ 1.02
CCNA1P78396 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNA1P78396 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC21.4■■□□□ 1.02
CCNA1P78396 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CCNA1P78396 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.4■■□□□ 1.02
CCNA1P78396 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.4■■□□□ 1.02
CCNA1P78396 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC21.39■■□□□ 1.02
CCNA1P78396 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCNA1P78396 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCNA1P78396 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCNA1P78396 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.01
CCNA1P78396 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CCNA1P78396 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC21.39■■□□□ 1.01
CCNA1P78396 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CCNA1P78396 FOSL1P1-201ENST00000511041 816 ntBASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms