Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
USP46P62068 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
USP46P62068 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
USP46P62068 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.83■□□□□ 0.76
USP46P62068 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP46P62068 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
USP46P62068 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP46P62068 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
USP46P62068 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.76
USP46P62068 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC19.83■□□□□ 0.76
USP46P62068 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC19.83■□□□□ 0.76
USP46P62068 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.83■□□□□ 0.76
USP46P62068 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
USP46P62068 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.83■□□□□ 0.76
USP46P62068 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.83■□□□□ 0.76
USP46P62068 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP46P62068 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC19.82■□□□□ 0.76
USP46P62068 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP46P62068 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP46P62068 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP46P62068 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.82■□□□□ 0.76
USP46P62068 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP46P62068 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP46P62068 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP46P62068 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP46P62068 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP46P62068 FAM8A6P-201ENST00000407496 1135 ntBASIC19.82■□□□□ 0.76
USP46P62068 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
USP46P62068 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.82■□□□□ 0.76
USP46P62068 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.82■□□□□ 0.76
USP46P62068 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP46P62068 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.82■□□□□ 0.76
USP46P62068 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.82■□□□□ 0.76
USP46P62068 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.82■□□□□ 0.76
USP46P62068 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC19.82■□□□□ 0.76
USP46P62068 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
USP46P62068 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.82■□□□□ 0.76
USP46P62068 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
USP46P62068 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
USP46P62068 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC19.82■□□□□ 0.76
USP46P62068 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
USP46P62068 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP46P62068 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP46P62068 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
USP46P62068 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.81■□□□□ 0.76
USP46P62068 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC19.81■□□□□ 0.76
USP46P62068 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC19.81■□□□□ 0.76
USP46P62068 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.81■□□□□ 0.76
USP46P62068 AC087388.1-201ENST00000571370 1112 ntBASIC19.81■□□□□ 0.76
USP46P62068 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC19.81■□□□□ 0.76
USP46P62068 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
USP46P62068 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.81■□□□□ 0.76
USP46P62068 FEM1AP3-201ENST00000403722 1741 ntBASIC19.81■□□□□ 0.76
USP46P62068 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
USP46P62068 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.81■□□□□ 0.76
USP46P62068 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP46P62068 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
USP46P62068 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
USP46P62068 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP46P62068 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP46P62068 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP46P62068 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP46P62068 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP46P62068 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC19.8■□□□□ 0.76
USP46P62068 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC19.8■□□□□ 0.76
USP46P62068 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP46P62068 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP46P62068 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP46P62068 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP46P62068 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.8■□□□□ 0.76
USP46P62068 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.8■□□□□ 0.76
USP46P62068 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
USP46P62068 AC140113.3-201ENST00000605663 199 ntBASIC19.8■□□□□ 0.76
USP46P62068 MYC-208ENST00000641036 567 ntBASIC19.8■□□□□ 0.76
USP46P62068 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP46P62068 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP46P62068 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP46P62068 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.8■□□□□ 0.76
USP46P62068 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP46P62068 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP46P62068 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.8■□□□□ 0.76
USP46P62068 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
USP46P62068 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
USP46P62068 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.79■□□□□ 0.76
USP46P62068 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP46P62068 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC19.79■□□□□ 0.76
USP46P62068 AC036111.1-201ENST00000533973 1582 ntBASIC19.79■□□□□ 0.76
USP46P62068 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC19.79■□□□□ 0.76
USP46P62068 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP46P62068 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC19.79■□□□□ 0.76
USP46P62068 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP46P62068 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP46P62068 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
USP46P62068 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
USP46P62068 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.79■□□□□ 0.76
USP46P62068 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.79■□□□□ 0.76
USP46P62068 RNF146-204ENST00000476956 884 ntTSL 2 BASIC19.79■□□□□ 0.76
USP46P62068 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
USP46P62068 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.79■□□□□ 0.76
USP46P62068 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms