Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN8P56748 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN8P56748 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
CLDN8P56748 MTMR9LP-203ENST00000426597 1545 ntBASIC17.96■□□□□ 0.47
CLDN8P56748 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN8P56748 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.96■□□□□ 0.47
CLDN8P56748 AC126763.1-201ENST00000552015 2118 ntBASIC17.96■□□□□ 0.47
CLDN8P56748 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.96■□□□□ 0.47
CLDN8P56748 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CLDN8P56748 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.96■□□□□ 0.46
CLDN8P56748 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.46
CLDN8P56748 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN8P56748 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN8P56748 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN8P56748 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN8P56748 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN8P56748 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN8P56748 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN8P56748 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN8P56748 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN8P56748 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN8P56748 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN8P56748 AC004980.1-204ENST00000429707 299 ntBASIC17.95■□□□□ 0.46
CLDN8P56748 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLDN8P56748 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.95■□□□□ 0.46
CLDN8P56748 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC17.95■□□□□ 0.46
CLDN8P56748 FBXO17-202ENST00000595329 1299 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLDN8P56748 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN8P56748 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN8P56748 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN8P56748 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CLDN8P56748 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN8P56748 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN8P56748 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN8P56748 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CLDN8P56748 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN8P56748 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CLDN8P56748 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN8P56748 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
CLDN8P56748 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN8P56748 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CLDN8P56748 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC17.95■□□□□ 0.46
CLDN8P56748 KRT8P32-201ENST00000512863 1461 ntBASIC17.95■□□□□ 0.46
CLDN8P56748 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN8P56748 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.94■□□□□ 0.46
CLDN8P56748 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN8P56748 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC17.94■□□□□ 0.46
CLDN8P56748 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CLDN8P56748 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN8P56748 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN8P56748 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN8P56748 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN8P56748 ESRRAP1-201ENST00000400596 1257 ntBASIC17.94■□□□□ 0.46
CLDN8P56748 NIFKP9-201ENST00000419265 221 ntBASIC17.94■□□□□ 0.46
CLDN8P56748 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.94■□□□□ 0.46
CLDN8P56748 RN7SL471P-201ENST00000580476 299 ntBASIC17.94■□□□□ 0.46
CLDN8P56748 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN8P56748 KRT8P3-201ENST00000519669 1449 ntBASIC17.94■□□□□ 0.46
CLDN8P56748 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CLDN8P56748 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.94■□□□□ 0.46
CLDN8P56748 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN8P56748 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN8P56748 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN8P56748 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC17.94■□□□□ 0.46
CLDN8P56748 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CLDN8P56748 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
CLDN8P56748 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CLDN8P56748 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN8P56748 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN8P56748 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN8P56748 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN8P56748 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN8P56748 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLDN8P56748 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
CLDN8P56748 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN8P56748 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN8P56748 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN8P56748 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN8P56748 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN8P56748 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN8P56748 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.93■□□□□ 0.46
CLDN8P56748 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN8P56748 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN8P56748 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN8P56748 KRT18P6-201ENST00000555540 1265 ntBASIC17.93■□□□□ 0.46
CLDN8P56748 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.93■□□□□ 0.46
CLDN8P56748 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN8P56748 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN8P56748 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN8P56748 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN8P56748 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN8P56748 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN8P56748 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CLDN8P56748 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN8P56748 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN8P56748 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.93■□□□□ 0.46
CLDN8P56748 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLDN8P56748 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CLDN8P56748 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CLDN8P56748 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms