Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMC4P56277 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMC4P56277 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.06□□□□□ -0.16
CMC4P56277 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC14.06□□□□□ -0.16
CMC4P56277 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMC4P56277 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
CMC4P56277 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC14.06□□□□□ -0.16
CMC4P56277 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
CMC4P56277 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CMC4P56277 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC14.06□□□□□ -0.16
CMC4P56277 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC14.06□□□□□ -0.16
CMC4P56277 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC14.06□□□□□ -0.16
CMC4P56277 AC005363.2-201ENST00000618631 242 ntBASIC14.06□□□□□ -0.16
CMC4P56277 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CMC4P56277 AC010947.1-201ENST00000623454 693 ntBASIC14.06□□□□□ -0.16
CMC4P56277 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CMC4P56277 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CMC4P56277 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
CMC4P56277 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
CMC4P56277 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CMC4P56277 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CMC4P56277 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMC4P56277 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC14.06□□□□□ -0.16
CMC4P56277 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMC4P56277 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMC4P56277 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMC4P56277 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.06□□□□□ -0.16
CMC4P56277 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CMC4P56277 AC092338.2-201ENST00000568827 1415 ntBASIC14.06□□□□□ -0.16
CMC4P56277 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
CMC4P56277 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CMC4P56277 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CMC4P56277 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMC4P56277 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.05□□□□□ -0.16
CMC4P56277 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CMC4P56277 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CMC4P56277 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMC4P56277 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMC4P56277 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMC4P56277 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC14.05□□□□□ -0.16
CMC4P56277 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMC4P56277 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.05□□□□□ -0.16
CMC4P56277 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CMC4P56277 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CMC4P56277 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CMC4P56277 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMC4P56277 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CMC4P56277 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC14.05□□□□□ -0.16
CMC4P56277 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMC4P56277 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.05□□□□□ -0.16
CMC4P56277 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC14.05□□□□□ -0.16
CMC4P56277 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CMC4P56277 AC007663.1-201ENST00000438948 1240 ntBASIC14.05□□□□□ -0.16
CMC4P56277 MCCD1P1-208ENST00000445732 328 ntBASIC14.05□□□□□ -0.16
CMC4P56277 TSPY15P-201ENST00000457163 923 ntBASIC14.05□□□□□ -0.16
CMC4P56277 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC14.05□□□□□ -0.16
CMC4P56277 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
CMC4P56277 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC14.05□□□□□ -0.16
CMC4P56277 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC14.05□□□□□ -0.16
CMC4P56277 AC097493.4-201ENST00000641197 219 ntBASIC14.05□□□□□ -0.16
CMC4P56277 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMC4P56277 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CMC4P56277 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
CMC4P56277 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.05□□□□□ -0.16
CMC4P56277 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
CMC4P56277 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
CMC4P56277 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMC4P56277 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMC4P56277 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.05□□□□□ -0.16
CMC4P56277 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
CMC4P56277 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
CMC4P56277 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMC4P56277 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC14.05□□□□□ -0.16
CMC4P56277 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
CMC4P56277 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC14.05□□□□□ -0.16
CMC4P56277 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.05□□□□□ -0.16
CMC4P56277 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMC4P56277 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC14.04□□□□□ -0.16
CMC4P56277 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMC4P56277 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.04□□□□□ -0.16
CMC4P56277 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMC4P56277 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMC4P56277 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC14.04□□□□□ -0.16
CMC4P56277 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CMC4P56277 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMC4P56277 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC14.04□□□□□ -0.16
CMC4P56277 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
CMC4P56277 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
CMC4P56277 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC14.04□□□□□ -0.16
CMC4P56277 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMC4P56277 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMC4P56277 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMC4P56277 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC14.04□□□□□ -0.16
CMC4P56277 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
CMC4P56277 ATP5G1P1-201ENST00000448724 379 ntBASIC14.04□□□□□ -0.16
CMC4P56277 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC14.04□□□□□ -0.16
CMC4P56277 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.04□□□□□ -0.16
CMC4P56277 MYC-208ENST00000641036 567 ntBASIC14.04□□□□□ -0.16
CMC4P56277 AL031432.5-201ENST00000641059 760 ntBASIC14.04□□□□□ -0.16
CMC4P56277 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms