Protein–RNA interactions for Protein: P54750

PDE1A, Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A, humanhuman

Predictions only

Length 535 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1AP54750 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC23.04■■□□□ 1.28
PDE1AP54750 DET1-205ENST00000558413 583 ntTSL 4 BASIC23.04■■□□□ 1.28
PDE1AP54750 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC23.04■■□□□ 1.28
PDE1AP54750 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDE1AP54750 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC23.04■■□□□ 1.28
PDE1AP54750 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC23.04■■□□□ 1.28
PDE1AP54750 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
PDE1AP54750 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDE1AP54750 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDE1AP54750 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
PDE1AP54750 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDE1AP54750 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDE1AP54750 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC23.03■■□□□ 1.28
PDE1AP54750 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PDE1AP54750 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDE1AP54750 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDE1AP54750 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC23.03■■□□□ 1.28
PDE1AP54750 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDE1AP54750 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDE1AP54750 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC23.03■■□□□ 1.28
PDE1AP54750 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PDE1AP54750 AL355075.4-201ENST00000554988 638 ntBASIC23.03■■□□□ 1.28
PDE1AP54750 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDE1AP54750 AP000525.1-201ENST00000608286 694 ntBASIC23.03■■□□□ 1.28
PDE1AP54750 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC23.03■■□□□ 1.28
PDE1AP54750 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC23.03■■□□□ 1.28
PDE1AP54750 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDE1AP54750 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDE1AP54750 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDE1AP54750 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDE1AP54750 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDE1AP54750 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDE1AP54750 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PDE1AP54750 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDE1AP54750 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDE1AP54750 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PDE1AP54750 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC23.03■■□□□ 1.28
PDE1AP54750 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
PDE1AP54750 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
PDE1AP54750 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
PDE1AP54750 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
PDE1AP54750 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC23.02■■□□□ 1.28
PDE1AP54750 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC23.02■■□□□ 1.28
PDE1AP54750 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC23.02■■□□□ 1.28
PDE1AP54750 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDE1AP54750 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PDE1AP54750 AL499627.1-201ENST00000569373 2188 ntBASIC23.02■■□□□ 1.28
PDE1AP54750 UNC93B2-201ENST00000285383 730 ntBASIC23.02■■□□□ 1.28
PDE1AP54750 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
PDE1AP54750 TSPY15P-201ENST00000457163 923 ntBASIC23.02■■□□□ 1.28
PDE1AP54750 CA15P1-201ENST00000481698 905 ntBASIC23.02■■□□□ 1.28
PDE1AP54750 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
PDE1AP54750 MIR4497-201ENST00000583208 89 ntBASIC23.02■■□□□ 1.28
PDE1AP54750 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC23.02■■□□□ 1.28
PDE1AP54750 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDE1AP54750 GRAMD4P8-201ENST00000605465 1115 ntBASIC23.02■■□□□ 1.28
PDE1AP54750 AL357033.4-201ENST00000617703 1807 ntBASIC23.02■■□□□ 1.28
PDE1AP54750 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PDE1AP54750 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
PDE1AP54750 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
PDE1AP54750 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC23.02■■□□□ 1.28
PDE1AP54750 AC005082.1-201ENST00000413042 2259 ntBASIC23.02■■□□□ 1.28
PDE1AP54750 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
PDE1AP54750 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC23.02■■□□□ 1.28
PDE1AP54750 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC23.01■■□□□ 1.27
PDE1AP54750 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDE1AP54750 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC23.01■■□□□ 1.27
PDE1AP54750 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDE1AP54750 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDE1AP54750 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDE1AP54750 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PDE1AP54750 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDE1AP54750 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDE1AP54750 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDE1AP54750 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
PDE1AP54750 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDE1AP54750 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDE1AP54750 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDE1AP54750 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDE1AP54750 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDE1AP54750 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC23.01■■□□□ 1.27
PDE1AP54750 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC23.01■■□□□ 1.27
PDE1AP54750 CYGB-204ENST00000589342 815 ntTSL 3 BASIC23.01■■□□□ 1.27
PDE1AP54750 SNX21-213ENST00000614929 587 ntTSL 5 BASIC23.01■■□□□ 1.27
PDE1AP54750 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC23.01■■□□□ 1.27
PDE1AP54750 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDE1AP54750 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
PDE1AP54750 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC23.01■■□□□ 1.27
PDE1AP54750 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDE1AP54750 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC23■■□□□ 1.27
PDE1AP54750 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC23■■□□□ 1.27
PDE1AP54750 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC23■■□□□ 1.27
PDE1AP54750 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
PDE1AP54750 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC23■■□□□ 1.27
PDE1AP54750 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PDE1AP54750 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC23■■□□□ 1.27
PDE1AP54750 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC23■■□□□ 1.27
PDE1AP54750 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
PDE1AP54750 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC23■■□□□ 1.27
PDE1AP54750 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms