Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMSP52788 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMSP52788 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMSP52788 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMSP52788 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMSP52788 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMSP52788 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMSP52788 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.66■□□□□ 0.42
SMSP52788 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
SMSP52788 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SMSP52788 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
SMSP52788 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
SMSP52788 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.65■□□□□ 0.42
SMSP52788 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMSP52788 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.65■□□□□ 0.42
SMSP52788 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMSP52788 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMSP52788 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMSP52788 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMSP52788 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMSP52788 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMSP52788 CRAT-202ENST00000393384 973 ntTSL 2 BASIC17.65■□□□□ 0.42
SMSP52788 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.65■□□□□ 0.42
SMSP52788 NIFKP9-201ENST00000419265 221 ntBASIC17.65■□□□□ 0.42
SMSP52788 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.65■□□□□ 0.42
SMSP52788 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.65■□□□□ 0.42
SMSP52788 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC17.65■□□□□ 0.42
SMSP52788 AC116562.2-201ENST00000507042 360 ntBASIC17.65■□□□□ 0.42
SMSP52788 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
SMSP52788 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.65■□□□□ 0.42
SMSP52788 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.65■□□□□ 0.42
SMSP52788 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.65■□□□□ 0.42
SMSP52788 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMSP52788 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMSP52788 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMSP52788 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.65■□□□□ 0.42
SMSP52788 AC116351.2-201ENST00000606540 1585 ntBASIC17.65■□□□□ 0.42
SMSP52788 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMSP52788 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMSP52788 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMSP52788 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
SMSP52788 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.65■□□□□ 0.42
SMSP52788 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
SMSP52788 KRT8P9-201ENST00000558927 1449 ntBASIC17.64■□□□□ 0.42
SMSP52788 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.64■□□□□ 0.42
SMSP52788 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC17.64■□□□□ 0.42
SMSP52788 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMSP52788 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SMSP52788 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMSP52788 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.64■□□□□ 0.41
SMSP52788 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SMSP52788 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SMSP52788 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SMSP52788 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMSP52788 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.64■□□□□ 0.41
SMSP52788 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMSP52788 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMSP52788 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC17.64■□□□□ 0.41
SMSP52788 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMSP52788 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.64■□□□□ 0.41
SMSP52788 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.64■□□□□ 0.41
SMSP52788 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.64■□□□□ 0.41
SMSP52788 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.64■□□□□ 0.41
SMSP52788 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.64■□□□□ 0.41
SMSP52788 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.64■□□□□ 0.41
SMSP52788 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.64■□□□□ 0.41
SMSP52788 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
SMSP52788 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMSP52788 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMSP52788 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC17.64■□□□□ 0.41
SMSP52788 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
SMSP52788 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.64■□□□□ 0.41
SMSP52788 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMSP52788 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMSP52788 TEX21P-204ENST00000641479 1693 ntBASIC17.64■□□□□ 0.41
SMSP52788 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
SMSP52788 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.64■□□□□ 0.41
SMSP52788 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
SMSP52788 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
SMSP52788 AC006333.2-201ENST00000607957 2099 ntBASIC17.63■□□□□ 0.41
SMSP52788 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMSP52788 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
SMSP52788 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMSP52788 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.63■□□□□ 0.41
SMSP52788 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMSP52788 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.63■□□□□ 0.41
SMSP52788 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMSP52788 KRT18P57-201ENST00000443599 1254 ntBASIC17.63■□□□□ 0.41
SMSP52788 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.63■□□□□ 0.41
SMSP52788 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.63■□□□□ 0.41
SMSP52788 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.63■□□□□ 0.41
SMSP52788 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.63■□□□□ 0.41
SMSP52788 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.63■□□□□ 0.41
SMSP52788 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMSP52788 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMSP52788 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
SMSP52788 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.63■□□□□ 0.41
SMSP52788 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.63■□□□□ 0.41
SMSP52788 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.63■□□□□ 0.41
SMSP52788 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms