Protein–RNA interactions for Protein: P49765

VEGFB, Vascular endothelial growth factor B, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFBP49765 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
VEGFBP49765 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VEGFBP49765 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
VEGFBP49765 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
VEGFBP49765 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
VEGFBP49765 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VEGFBP49765 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VEGFBP49765 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VEGFBP49765 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
VEGFBP49765 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC21.68■■□□□ 1.06
VEGFBP49765 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC21.68■■□□□ 1.06
VEGFBP49765 CFL1-202ENST00000524553 860 ntTSL 2 BASIC21.68■■□□□ 1.06
VEGFBP49765 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC21.68■■□□□ 1.06
VEGFBP49765 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VEGFBP49765 SPCS2P1-201ENST00000561636 679 ntBASIC21.68■■□□□ 1.06
VEGFBP49765 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
VEGFBP49765 AC106028.4-201ENST00000614509 607 ntBASIC21.68■■□□□ 1.06
VEGFBP49765 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC21.68■■□□□ 1.06
VEGFBP49765 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
VEGFBP49765 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
VEGFBP49765 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC21.68■■□□□ 1.06
VEGFBP49765 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC21.68■■□□□ 1.06
VEGFBP49765 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VEGFBP49765 KRT8P3-201ENST00000519669 1449 ntBASIC21.68■■□□□ 1.06
VEGFBP49765 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC21.68■■□□□ 1.06
VEGFBP49765 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
VEGFBP49765 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC21.68■■□□□ 1.06
VEGFBP49765 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
VEGFBP49765 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC21.68■■□□□ 1.06
VEGFBP49765 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
VEGFBP49765 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC21.68■■□□□ 1.06
VEGFBP49765 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
VEGFBP49765 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
VEGFBP49765 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VEGFBP49765 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
VEGFBP49765 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC21.67■■□□□ 1.06
VEGFBP49765 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
VEGFBP49765 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC21.67■■□□□ 1.06
VEGFBP49765 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
VEGFBP49765 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VEGFBP49765 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
VEGFBP49765 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC21.67■■□□□ 1.06
VEGFBP49765 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VEGFBP49765 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VEGFBP49765 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC21.67■■□□□ 1.06
VEGFBP49765 PNKD-204ENST00000436005 978 ntTSL 5 BASIC21.67■■□□□ 1.06
VEGFBP49765 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
VEGFBP49765 PAWRP1-201ENST00000451083 565 ntBASIC21.67■■□□□ 1.06
VEGFBP49765 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC21.67■■□□□ 1.06
VEGFBP49765 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
VEGFBP49765 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC21.67■■□□□ 1.06
VEGFBP49765 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC21.67■■□□□ 1.06
VEGFBP49765 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VEGFBP49765 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC21.67■■□□□ 1.06
VEGFBP49765 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
VEGFBP49765 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
VEGFBP49765 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VEGFBP49765 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
VEGFBP49765 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VEGFBP49765 HOXB1-202ENST00000577092 1414 ntBASIC21.66■■□□□ 1.06
VEGFBP49765 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC21.66■■□□□ 1.06
VEGFBP49765 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VEGFBP49765 PFDN6-201ENST00000374606 740 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VEGFBP49765 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VEGFBP49765 PNMT-202ENST00000394246 821 ntTSL 2 BASIC21.66■■□□□ 1.06
VEGFBP49765 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VEGFBP49765 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.66■■□□□ 1.06
VEGFBP49765 UNC93B6-202ENST00000528242 690 ntBASIC21.66■■□□□ 1.06
VEGFBP49765 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC21.66■■□□□ 1.06
VEGFBP49765 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC21.66■■□□□ 1.06
VEGFBP49765 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.66■■□□□ 1.06
VEGFBP49765 MIR1199-201ENST00000621445 119 ntBASIC21.66■■□□□ 1.06
VEGFBP49765 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
VEGFBP49765 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VEGFBP49765 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
VEGFBP49765 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VEGFBP49765 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC21.66■■□□□ 1.06
VEGFBP49765 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
VEGFBP49765 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC21.66■■□□□ 1.06
VEGFBP49765 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
VEGFBP49765 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC21.65■■□□□ 1.06
VEGFBP49765 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VEGFBP49765 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC21.65■■□□□ 1.06
VEGFBP49765 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VEGFBP49765 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VEGFBP49765 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.65■■□□□ 1.06
VEGFBP49765 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VEGFBP49765 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC21.65■■□□□ 1.06
VEGFBP49765 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC21.65■■□□□ 1.06
VEGFBP49765 OR7E14P-202ENST00000530490 1290 ntBASIC21.65■■□□□ 1.06
VEGFBP49765 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
VEGFBP49765 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC21.65■■□□□ 1.06
VEGFBP49765 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC21.65■■□□□ 1.06
VEGFBP49765 PRR29-209ENST00000582540 967 ntTSL 2 BASIC21.65■■□□□ 1.06
VEGFBP49765 AC104417.2-201ENST00000562989 1793 ntBASIC21.65■■□□□ 1.06
VEGFBP49765 AC006128.1-201ENST00000624704 1661 ntBASIC21.65■■□□□ 1.06
VEGFBP49765 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC21.65■■□□□ 1.06
VEGFBP49765 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
VEGFBP49765 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
VEGFBP49765 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.64■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 18.7 ms