Protein–RNA interactions for Protein: P48742

LHX1, LIM/homeobox protein Lhx1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX1P48742 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LHX1P48742 AC092647.4-201ENST00000457211 535 ntBASIC19.97■□□□□ 0.79
LHX1P48742 KRT18P35-201ENST00000510488 1269 ntBASIC19.97■□□□□ 0.79
LHX1P48742 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.97■□□□□ 0.79
LHX1P48742 RMI2-205ENST00000576027 818 ntTSL 2 BASIC19.97■□□□□ 0.79
LHX1P48742 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC19.97■□□□□ 0.79
LHX1P48742 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.97■□□□□ 0.79
LHX1P48742 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LHX1P48742 AL445228.2-201ENST00000605589 952 ntBASIC19.97■□□□□ 0.79
LHX1P48742 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.97■□□□□ 0.79
LHX1P48742 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LHX1P48742 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
LHX1P48742 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
LHX1P48742 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.97■□□□□ 0.79
LHX1P48742 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LHX1P48742 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
LHX1P48742 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.97■□□□□ 0.79
LHX1P48742 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LHX1P48742 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
LHX1P48742 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.96■□□□□ 0.79
LHX1P48742 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.96■□□□□ 0.79
LHX1P48742 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LHX1P48742 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.96■□□□□ 0.79
LHX1P48742 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.96■□□□□ 0.79
LHX1P48742 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.96■□□□□ 0.79
LHX1P48742 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LHX1P48742 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LHX1P48742 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LHX1P48742 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LHX1P48742 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LHX1P48742 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.96■□□□□ 0.79
LHX1P48742 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.96■□□□□ 0.79
LHX1P48742 ETFA-216ENST00000560726 942 ntTSL 3 BASIC19.96■□□□□ 0.79
LHX1P48742 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
LHX1P48742 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC19.96■□□□□ 0.79
LHX1P48742 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC19.96■□□□□ 0.79
LHX1P48742 NTF6B-201ENST00000591913 560 ntBASIC19.96■□□□□ 0.79
LHX1P48742 AC068587.9-201ENST00000641814 219 ntBASIC19.96■□□□□ 0.79
LHX1P48742 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
LHX1P48742 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.96■□□□□ 0.79
LHX1P48742 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LHX1P48742 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LHX1P48742 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LHX1P48742 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LHX1P48742 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
LHX1P48742 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.95■□□□□ 0.79
LHX1P48742 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.95■□□□□ 0.78
LHX1P48742 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LHX1P48742 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
LHX1P48742 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LHX1P48742 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.95■□□□□ 0.78
LHX1P48742 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
LHX1P48742 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LHX1P48742 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LHX1P48742 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.95■□□□□ 0.78
LHX1P48742 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
LHX1P48742 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
LHX1P48742 MIR564-202ENST00000385049 94 ntBASIC19.95■□□□□ 0.78
LHX1P48742 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.95■□□□□ 0.78
LHX1P48742 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.95■□□□□ 0.78
LHX1P48742 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LHX1P48742 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.95■□□□□ 0.78
LHX1P48742 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.95■□□□□ 0.78
LHX1P48742 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
LHX1P48742 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
LHX1P48742 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LHX1P48742 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.95■□□□□ 0.78
LHX1P48742 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.95■□□□□ 0.78
LHX1P48742 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.95■□□□□ 0.78
LHX1P48742 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
LHX1P48742 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
LHX1P48742 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LHX1P48742 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LHX1P48742 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LHX1P48742 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LHX1P48742 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC19.94■□□□□ 0.78
LHX1P48742 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.94■□□□□ 0.78
LHX1P48742 KRT8P7-201ENST00000533003 1432 ntBASIC19.94■□□□□ 0.78
LHX1P48742 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
LHX1P48742 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LHX1P48742 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
LHX1P48742 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LHX1P48742 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.94■□□□□ 0.78
LHX1P48742 ARMC10P1-201ENST00000313754 855 ntBASIC19.94■□□□□ 0.78
LHX1P48742 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
LHX1P48742 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
LHX1P48742 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LHX1P48742 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LHX1P48742 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
LHX1P48742 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LHX1P48742 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LHX1P48742 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LHX1P48742 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC19.94■□□□□ 0.78
LHX1P48742 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LHX1P48742 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
LHX1P48742 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.94■□□□□ 0.78
LHX1P48742 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC19.94■□□□□ 0.78
LHX1P48742 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.94■□□□□ 0.78
LHX1P48742 GCSHP2-201ENST00000560971 527 ntBASIC19.94■□□□□ 0.78
LHX1P48742 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms