Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
SOX2P48431 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX2P48431 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.61■□□□□ 0.25
SOX2P48431 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX2P48431 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.61■□□□□ 0.25
SOX2P48431 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
SOX2P48431 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC16.61■□□□□ 0.25
SOX2P48431 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX2P48431 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC16.61■□□□□ 0.25
SOX2P48431 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX2P48431 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX2P48431 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX2P48431 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX2P48431 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX2P48431 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX2P48431 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX2P48431 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SOX2P48431 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX2P48431 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
SOX2P48431 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
SOX2P48431 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX2P48431 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX2P48431 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX2P48431 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX2P48431 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX2P48431 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.61■□□□□ 0.25
SOX2P48431 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.61■□□□□ 0.25
SOX2P48431 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SOX2P48431 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX2P48431 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX2P48431 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX2P48431 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.6■□□□□ 0.25
SOX2P48431 PXK-206ENST00000463280 2825 ntTSL 2 BASIC16.6■□□□□ 0.25
SOX2P48431 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SOX2P48431 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.6■□□□□ 0.25
SOX2P48431 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX2P48431 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX2P48431 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.6■□□□□ 0.25
SOX2P48431 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX2P48431 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX2P48431 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX2P48431 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SOX2P48431 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX2P48431 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX2P48431 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC16.6■□□□□ 0.25
SOX2P48431 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SOX2P48431 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX2P48431 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC16.6■□□□□ 0.25
SOX2P48431 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC16.6■□□□□ 0.25
SOX2P48431 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.6■□□□□ 0.25
SOX2P48431 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX2P48431 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SOX2P48431 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SOX2P48431 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX2P48431 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX2P48431 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.6■□□□□ 0.25
SOX2P48431 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX2P48431 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SOX2P48431 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SOX2P48431 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX2P48431 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC16.59■□□□□ 0.25
SOX2P48431 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX2P48431 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX2P48431 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SOX2P48431 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX2P48431 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SOX2P48431 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SOX2P48431 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SOX2P48431 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SOX2P48431 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SOX2P48431 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SOX2P48431 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX2P48431 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.59■□□□□ 0.25
SOX2P48431 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SOX2P48431 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.59■□□□□ 0.25
SOX2P48431 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX2P48431 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
SOX2P48431 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX2P48431 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SOX2P48431 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SOX2P48431 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SOX2P48431 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX2P48431 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX2P48431 CROCCP5-201ENST00000436658 830 ntBASIC16.59■□□□□ 0.25
SOX2P48431 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.59■□□□□ 0.25
SOX2P48431 ABHD17AP6-201ENST00000458502 1044 ntBASIC16.59■□□□□ 0.25
SOX2P48431 AC083906.2-201ENST00000511578 360 ntBASIC16.59■□□□□ 0.25
SOX2P48431 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.59■□□□□ 0.25
SOX2P48431 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.59■□□□□ 0.25
SOX2P48431 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX2P48431 AC092118.2-201ENST00000613495 667 ntBASIC16.59■□□□□ 0.25
SOX2P48431 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC16.59■□□□□ 0.25
SOX2P48431 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX2P48431 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX2P48431 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.59■□□□□ 0.25
SOX2P48431 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SOX2P48431 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX2P48431 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SOX2P48431 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SOX2P48431 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms