Protein–RNA interactions for Protein: P38936

CDKN1A, Cyclin-dependent kinase inhibitor 1, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1AP38936 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDKN1AP38936 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDKN1AP38936 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC16.08■□□□□ 0.16
CDKN1AP38936 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
CDKN1AP38936 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDKN1AP38936 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDKN1AP38936 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDKN1AP38936 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.08■□□□□ 0.16
CDKN1AP38936 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC16.08■□□□□ 0.16
CDKN1AP38936 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDKN1AP38936 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDKN1AP38936 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
CDKN1AP38936 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC16.08■□□□□ 0.16
CDKN1AP38936 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDKN1AP38936 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
CDKN1AP38936 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDKN1AP38936 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CDKN1AP38936 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDKN1AP38936 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDKN1AP38936 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC16.08■□□□□ 0.16
CDKN1AP38936 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CDKN1AP38936 AC026471.1-201ENST00000564629 3026 ntBASIC16.08■□□□□ 0.16
CDKN1AP38936 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN1AP38936 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC16.07■□□□□ 0.16
CDKN1AP38936 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN1AP38936 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CDKN1AP38936 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN1AP38936 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN1AP38936 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN1AP38936 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CDKN1AP38936 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN1AP38936 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN1AP38936 TSPY21P-201ENST00000433481 731 ntBASIC16.07■□□□□ 0.16
CDKN1AP38936 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC16.07■□□□□ 0.16
CDKN1AP38936 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC16.07■□□□□ 0.16
CDKN1AP38936 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.07■□□□□ 0.16
CDKN1AP38936 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN1AP38936 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC16.07■□□□□ 0.16
CDKN1AP38936 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.07■□□□□ 0.16
CDKN1AP38936 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN1AP38936 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CDKN1AP38936 HYMAI.1-201ENST00000620949 238 ntBASIC16.07■□□□□ 0.16
CDKN1AP38936 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.07■□□□□ 0.16
CDKN1AP38936 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN1AP38936 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN1AP38936 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC16.07■□□□□ 0.16
CDKN1AP38936 GPAT2P1-201ENST00000444924 1672 ntBASIC16.07■□□□□ 0.16
CDKN1AP38936 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN1AP38936 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CDKN1AP38936 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN1AP38936 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN1AP38936 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN1AP38936 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN1AP38936 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN1AP38936 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.07■□□□□ 0.16
CDKN1AP38936 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC16.07■□□□□ 0.16
CDKN1AP38936 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN1AP38936 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN1AP38936 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CDKN1AP38936 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN1AP38936 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN1AP38936 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.06■□□□□ 0.16
CDKN1AP38936 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN1AP38936 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN1AP38936 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN1AP38936 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.06■□□□□ 0.16
CDKN1AP38936 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.06■□□□□ 0.16
CDKN1AP38936 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN1AP38936 AC036111.1-201ENST00000533973 1582 ntBASIC16.06■□□□□ 0.16
CDKN1AP38936 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN1AP38936 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
CDKN1AP38936 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN1AP38936 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.06■□□□□ 0.16
CDKN1AP38936 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN1AP38936 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CDKN1AP38936 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.06■□□□□ 0.16
CDKN1AP38936 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN1AP38936 DUSP5P1-201ENST00000441325 1139 ntBASIC16.06■□□□□ 0.16
CDKN1AP38936 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC16.06■□□□□ 0.16
CDKN1AP38936 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC16.06■□□□□ 0.16
CDKN1AP38936 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN1AP38936 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN1AP38936 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN1AP38936 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN1AP38936 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CDKN1AP38936 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN1AP38936 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
CDKN1AP38936 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
CDKN1AP38936 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN1AP38936 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CDKN1AP38936 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.05■□□□□ 0.16
CDKN1AP38936 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CDKN1AP38936 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.05■□□□□ 0.16
CDKN1AP38936 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN1AP38936 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
CDKN1AP38936 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN1AP38936 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN1AP38936 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN1AP38936 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CDKN1AP38936 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms