Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.29■□□□□ 0.36
SHC1P29353 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC1P29353 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC17.29■□□□□ 0.36
SHC1P29353 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC1P29353 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC1P29353 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC1P29353 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SHC1P29353 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC1P29353 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC1P29353 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SHC1P29353 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHC1P29353 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC1P29353 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SHC1P29353 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHC1P29353 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC1P29353 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHC1P29353 AC104581.1-202ENST00000635932 2618 ntBASIC17.28■□□□□ 0.36
SHC1P29353 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHC1P29353 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SHC1P29353 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
SHC1P29353 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC1P29353 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC1P29353 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC1P29353 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC1P29353 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC1P29353 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.28■□□□□ 0.36
SHC1P29353 RBM17P1-201ENST00000453646 1190 ntBASIC17.28■□□□□ 0.36
SHC1P29353 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
SHC1P29353 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.28■□□□□ 0.36
SHC1P29353 AC130371.2-201ENST00000619443 611 ntBASIC17.28■□□□□ 0.36
SHC1P29353 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.28■□□□□ 0.36
SHC1P29353 FSCN1P1-201ENST00000568912 1481 ntBASIC17.28■□□□□ 0.36
SHC1P29353 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC1P29353 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC1P29353 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC1P29353 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
SHC1P29353 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC1P29353 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SHC1P29353 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC1P29353 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC1P29353 AC138932.1-201ENST00000534164 6830 ntBASIC17.28■□□□□ 0.36
SHC1P29353 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.28■□□□□ 0.36
SHC1P29353 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC1P29353 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SHC1P29353 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SHC1P29353 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SHC1P29353 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC17.27■□□□□ 0.36
SHC1P29353 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHC1P29353 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SHC1P29353 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC17.27■□□□□ 0.36
SHC1P29353 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SHC1P29353 KRT17P2-201ENST00000300992 1314 ntBASIC17.27■□□□□ 0.36
SHC1P29353 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SHC1P29353 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHC1P29353 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.27■□□□□ 0.36
SHC1P29353 AC079598.2-202ENST00000546624 1451 ntBASIC17.27■□□□□ 0.36
SHC1P29353 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.27■□□□□ 0.36
SHC1P29353 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.27■□□□□ 0.36
SHC1P29353 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHC1P29353 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.27■□□□□ 0.36
SHC1P29353 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.27■□□□□ 0.36
SHC1P29353 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
SHC1P29353 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SHC1P29353 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.27■□□□□ 0.36
SHC1P29353 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
SHC1P29353 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.27■□□□□ 0.36
SHC1P29353 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.27■□□□□ 0.36
SHC1P29353 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.27■□□□□ 0.36
SHC1P29353 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHC1P29353 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SHC1P29353 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.27■□□□□ 0.36
SHC1P29353 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.27■□□□□ 0.36
SHC1P29353 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
SHC1P29353 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHC1P29353 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SHC1P29353 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHC1P29353 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
SHC1P29353 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHC1P29353 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SHC1P29353 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.27■□□□□ 0.35
SHC1P29353 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC1P29353 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC1P29353 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
SHC1P29353 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC1P29353 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC1P29353 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC1P29353 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC1P29353 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.26■□□□□ 0.35
SHC1P29353 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC1P29353 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.26■□□□□ 0.35
SHC1P29353 TSPY23P-201ENST00000440136 739 ntBASIC17.26■□□□□ 0.35
SHC1P29353 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.26■□□□□ 0.35
SHC1P29353 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SHC1P29353 AP000525.1-201ENST00000608286 694 ntBASIC17.26■□□□□ 0.35
SHC1P29353 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.26■□□□□ 0.35
SHC1P29353 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHC1P29353 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC1P29353 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SHC1P29353 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SHC1P29353 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms