Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA3P29320 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA3P29320 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA3P29320 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA3P29320 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.36■□□□□ 0.53
EPHA3P29320 HCG11-201ENST00000411553 5696 ntBASIC18.36■□□□□ 0.53
EPHA3P29320 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC18.36■□□□□ 0.53
EPHA3P29320 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.36■□□□□ 0.53
EPHA3P29320 TSPY21P-201ENST00000433481 731 ntBASIC18.36■□□□□ 0.53
EPHA3P29320 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC18.36■□□□□ 0.53
EPHA3P29320 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.36■□□□□ 0.53
EPHA3P29320 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.36■□□□□ 0.53
EPHA3P29320 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.36■□□□□ 0.53
EPHA3P29320 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.36■□□□□ 0.53
EPHA3P29320 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.36■□□□□ 0.53
EPHA3P29320 AC083906.2-201ENST00000511578 360 ntBASIC18.36■□□□□ 0.53
EPHA3P29320 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
EPHA3P29320 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
EPHA3P29320 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA3P29320 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA3P29320 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.36■□□□□ 0.53
EPHA3P29320 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
EPHA3P29320 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
EPHA3P29320 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.35■□□□□ 0.53
EPHA3P29320 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHA3P29320 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EPHA3P29320 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
EPHA3P29320 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHA3P29320 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
EPHA3P29320 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHA3P29320 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHA3P29320 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.35■□□□□ 0.53
EPHA3P29320 PNMA6B-201ENST00000538162 1200 ntBASIC18.35■□□□□ 0.53
EPHA3P29320 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC18.35■□□□□ 0.53
EPHA3P29320 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.35■□□□□ 0.53
EPHA3P29320 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHA3P29320 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EPHA3P29320 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
EPHA3P29320 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
EPHA3P29320 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
EPHA3P29320 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHA3P29320 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
EPHA3P29320 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
EPHA3P29320 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.34■□□□□ 0.53
EPHA3P29320 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA3P29320 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA3P29320 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHA3P29320 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA3P29320 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA3P29320 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA3P29320 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.34■□□□□ 0.53
EPHA3P29320 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHA3P29320 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA3P29320 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA3P29320 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA3P29320 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA3P29320 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA3P29320 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA3P29320 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHA3P29320 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.34■□□□□ 0.53
EPHA3P29320 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
EPHA3P29320 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
EPHA3P29320 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA3P29320 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.34■□□□□ 0.53
EPHA3P29320 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.34■□□□□ 0.53
EPHA3P29320 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.34■□□□□ 0.53
EPHA3P29320 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHA3P29320 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHA3P29320 AL121832.2-201ENST00000610979 668 ntBASIC18.34■□□□□ 0.53
EPHA3P29320 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA3P29320 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA3P29320 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA3P29320 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.34■□□□□ 0.53
EPHA3P29320 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA3P29320 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA3P29320 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA3P29320 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
EPHA3P29320 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC18.34■□□□□ 0.53
EPHA3P29320 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA3P29320 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA3P29320 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
EPHA3P29320 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
EPHA3P29320 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
EPHA3P29320 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
EPHA3P29320 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
EPHA3P29320 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
EPHA3P29320 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
EPHA3P29320 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.33■□□□□ 0.53
EPHA3P29320 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
EPHA3P29320 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
EPHA3P29320 AL499627.1-201ENST00000569373 2188 ntBASIC18.33■□□□□ 0.52
EPHA3P29320 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.33■□□□□ 0.52
EPHA3P29320 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA3P29320 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA3P29320 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.33■□□□□ 0.52
EPHA3P29320 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA3P29320 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
EPHA3P29320 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC18.33■□□□□ 0.52
EPHA3P29320 TSPY23P-201ENST00000440136 739 ntBASIC18.33■□□□□ 0.52
EPHA3P29320 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms