Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
MMP8P22894 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP8P22894 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP8P22894 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP8P22894 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP8P22894 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
MMP8P22894 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP8P22894 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP8P22894 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP8P22894 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP8P22894 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MMP8P22894 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.84■□□□□ 0.77
MMP8P22894 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19.84■□□□□ 0.77
MMP8P22894 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP8P22894 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.84■□□□□ 0.77
MMP8P22894 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
MMP8P22894 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP8P22894 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
MMP8P22894 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.84■□□□□ 0.77
MMP8P22894 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
MMP8P22894 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.84■□□□□ 0.77
MMP8P22894 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC19.84■□□□□ 0.77
MMP8P22894 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP8P22894 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC19.83■□□□□ 0.77
MMP8P22894 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MMP8P22894 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.83■□□□□ 0.77
MMP8P22894 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
MMP8P22894 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC19.83■□□□□ 0.77
MMP8P22894 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
MMP8P22894 SNORA78-201ENST00000459373 127 ntBASIC19.83■□□□□ 0.77
MMP8P22894 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
MMP8P22894 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.83■□□□□ 0.77
MMP8P22894 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.83■□□□□ 0.76
MMP8P22894 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
MMP8P22894 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.83■□□□□ 0.76
MMP8P22894 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.83■□□□□ 0.76
MMP8P22894 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MMP8P22894 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC19.83■□□□□ 0.76
MMP8P22894 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
MMP8P22894 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC19.83■□□□□ 0.76
MMP8P22894 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP8P22894 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP8P22894 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP8P22894 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.82■□□□□ 0.76
MMP8P22894 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
MMP8P22894 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP8P22894 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC19.82■□□□□ 0.76
MMP8P22894 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP8P22894 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP8P22894 AL109659.2-201ENST00000606809 1674 ntBASIC19.82■□□□□ 0.76
MMP8P22894 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP8P22894 AC079598.2-202ENST00000546624 1451 ntBASIC19.82■□□□□ 0.76
MMP8P22894 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MMP8P22894 AL357033.4-201ENST00000617703 1807 ntBASIC19.82■□□□□ 0.76
MMP8P22894 UNC93B2-201ENST00000285383 730 ntBASIC19.82■□□□□ 0.76
MMP8P22894 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP8P22894 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
MMP8P22894 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MMP8P22894 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP8P22894 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.82■□□□□ 0.76
MMP8P22894 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP8P22894 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.82■□□□□ 0.76
MMP8P22894 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
MMP8P22894 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP8P22894 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MMP8P22894 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.82■□□□□ 0.76
MMP8P22894 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MMP8P22894 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
MMP8P22894 AC009113.1-201ENST00000570267 2443 ntBASIC19.82■□□□□ 0.76
MMP8P22894 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.82■□□□□ 0.76
MMP8P22894 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP8P22894 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
MMP8P22894 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
MMP8P22894 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.82■□□□□ 0.76
MMP8P22894 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.82■□□□□ 0.76
MMP8P22894 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP8P22894 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP8P22894 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.81■□□□□ 0.76
MMP8P22894 AC104581.1-202ENST00000635932 2618 ntBASIC19.81■□□□□ 0.76
MMP8P22894 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP8P22894 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
MMP8P22894 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP8P22894 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP8P22894 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP8P22894 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC19.81■□□□□ 0.76
MMP8P22894 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP8P22894 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP8P22894 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
MMP8P22894 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
MMP8P22894 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.81■□□□□ 0.76
MMP8P22894 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP8P22894 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.81■□□□□ 0.76
MMP8P22894 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
MMP8P22894 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
MMP8P22894 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.81■□□□□ 0.76
MMP8P22894 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.81■□□□□ 0.76
MMP8P22894 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC19.81■□□□□ 0.76
MMP8P22894 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.81■□□□□ 0.76
MMP8P22894 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
MMP8P22894 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms