Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
KCNA3P22001 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
KCNA3P22001 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC23.12■■□□□ 1.29
KCNA3P22001 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
KCNA3P22001 POM121L3P-201ENST00000419331 1163 ntBASIC23.12■■□□□ 1.29
KCNA3P22001 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC23.12■■□□□ 1.29
KCNA3P22001 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
KCNA3P22001 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC23.12■■□□□ 1.29
KCNA3P22001 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC23.12■■□□□ 1.29
KCNA3P22001 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
KCNA3P22001 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC23.12■■□□□ 1.29
KCNA3P22001 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC23.12■■□□□ 1.29
KCNA3P22001 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
KCNA3P22001 AC139887.3-201ENST00000568585 713 ntBASIC23.12■■□□□ 1.29
KCNA3P22001 MIR5100-201ENST00000579544 119 ntBASIC23.12■■□□□ 1.29
KCNA3P22001 BNIP3P18-201ENST00000593976 575 ntBASIC23.12■■□□□ 1.29
KCNA3P22001 AL355385.1-201ENST00000606123 409 ntBASIC23.12■■□□□ 1.29
KCNA3P22001 AC008556.1-201ENST00000610908 2040 ntBASIC23.12■■□□□ 1.29
KCNA3P22001 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
KCNA3P22001 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC23.12■■□□□ 1.29
KCNA3P22001 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC23.12■■□□□ 1.29
KCNA3P22001 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
KCNA3P22001 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC23.12■■□□□ 1.29
KCNA3P22001 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
KCNA3P22001 PBK-203ENST00000522944 1499 ntTSL 2 BASIC23.11■■□□□ 1.29
KCNA3P22001 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
KCNA3P22001 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
KCNA3P22001 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
KCNA3P22001 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
KCNA3P22001 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
KCNA3P22001 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
KCNA3P22001 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
KCNA3P22001 LITAF-211ENST00000572255 516 ntTSL 4 BASIC23.11■■□□□ 1.29
KCNA3P22001 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
KCNA3P22001 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
KCNA3P22001 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
KCNA3P22001 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
KCNA3P22001 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
KCNA3P22001 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
KCNA3P22001 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
KCNA3P22001 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
KCNA3P22001 AL512408.1-201ENST00000569378 2000 ntBASIC23.11■■□□□ 1.29
KCNA3P22001 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
KCNA3P22001 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
KCNA3P22001 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
KCNA3P22001 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC23.1■■□□□ 1.29
KCNA3P22001 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC23.1■■□□□ 1.29
KCNA3P22001 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
KCNA3P22001 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC23.1■■□□□ 1.29
KCNA3P22001 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
KCNA3P22001 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
KCNA3P22001 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC23.1■■□□□ 1.29
KCNA3P22001 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
KCNA3P22001 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
KCNA3P22001 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC23.1■■□□□ 1.29
KCNA3P22001 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC23.1■■□□□ 1.29
KCNA3P22001 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC23.1■■□□□ 1.29
KCNA3P22001 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC23.1■■□□□ 1.29
KCNA3P22001 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC23.1■■□□□ 1.29
KCNA3P22001 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC23.1■■□□□ 1.29
KCNA3P22001 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC23.1■■□□□ 1.29
KCNA3P22001 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC23.1■■□□□ 1.29
KCNA3P22001 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC23.1■■□□□ 1.29
KCNA3P22001 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC23.1■■□□□ 1.29
KCNA3P22001 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
KCNA3P22001 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
KCNA3P22001 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KCNA3P22001 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KCNA3P22001 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KCNA3P22001 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KCNA3P22001 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KCNA3P22001 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC23.09■■□□□ 1.29
KCNA3P22001 HNRNPDP1-201ENST00000439535 754 ntBASIC23.09■■□□□ 1.29
KCNA3P22001 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC23.09■■□□□ 1.29
KCNA3P22001 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KCNA3P22001 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC23.09■■□□□ 1.29
KCNA3P22001 AL691403.2-201ENST00000618460 490 ntBASIC23.09■■□□□ 1.29
KCNA3P22001 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC23.09■■□□□ 1.29
KCNA3P22001 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
KCNA3P22001 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
KCNA3P22001 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
KCNA3P22001 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
KCNA3P22001 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC23.09■■□□□ 1.29
KCNA3P22001 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
KCNA3P22001 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC23.08■■□□□ 1.29
KCNA3P22001 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
KCNA3P22001 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
KCNA3P22001 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
KCNA3P22001 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
KCNA3P22001 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC23.08■■□□□ 1.29
KCNA3P22001 AC093909.1-201ENST00000504731 1122 ntBASIC23.08■■□□□ 1.29
KCNA3P22001 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC23.08■■□□□ 1.29
KCNA3P22001 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC23.08■■□□□ 1.29
KCNA3P22001 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
KCNA3P22001 AL591684.3-201ENST00000605187 298 ntBASIC23.08■■□□□ 1.29
KCNA3P22001 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC23.08■■□□□ 1.29
KCNA3P22001 AL139424.1-201ENST00000607572 797 ntBASIC23.08■■□□□ 1.29
KCNA3P22001 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
KCNA3P22001 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
KCNA3P22001 FAM215A-202ENST00000632077 792 ntBASIC23.08■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms