Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 POM121L13P-201ENST00000422362 380 ntBASIC17.54■□□□□ 0.4
TNFRSF1BP20333 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 TSPY21P-201ENST00000433481 731 ntBASIC17.54■□□□□ 0.4
TNFRSF1BP20333 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 AC104771.1-201ENST00000603335 964 ntBASIC17.54■□□□□ 0.4
TNFRSF1BP20333 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 NBPF21P-201ENST00000425093 1451 ntBASIC17.54■□□□□ 0.4
TNFRSF1BP20333 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TNFRSF1BP20333 AL499627.1-201ENST00000569373 2188 ntBASIC17.53■□□□□ 0.4
TNFRSF1BP20333 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 AC079598.2-202ENST00000546624 1451 ntBASIC17.53■□□□□ 0.4
TNFRSF1BP20333 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 C1QL1P1-201ENST00000568105 661 ntBASIC17.53■□□□□ 0.4
TNFRSF1BP20333 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
TNFRSF1BP20333 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TNFRSF1BP20333 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFRSF1BP20333 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.52■□□□□ 0.4
TNFRSF1BP20333 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFRSF1BP20333 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.52■□□□□ 0.4
TNFRSF1BP20333 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TNFRSF1BP20333 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
TNFRSF1BP20333 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFRSF1BP20333 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFRSF1BP20333 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
TNFRSF1BP20333 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFRSF1BP20333 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
TNFRSF1BP20333 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TNFRSF1BP20333 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.52■□□□□ 0.4
TNFRSF1BP20333 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.52■□□□□ 0.4
TNFRSF1BP20333 PRKY-204ENST00000533551 1019 ntBASIC17.52■□□□□ 0.4
TNFRSF1BP20333 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.52■□□□□ 0.4
TNFRSF1BP20333 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.52■□□□□ 0.4
TNFRSF1BP20333 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.52■□□□□ 0.4
TNFRSF1BP20333 AC008403.3-201ENST00000598924 454 ntBASIC17.52■□□□□ 0.4
TNFRSF1BP20333 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.52■□□□□ 0.4
TNFRSF1BP20333 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFRSF1BP20333 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
TNFRSF1BP20333 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
TNFRSF1BP20333 AC068880.1-201ENST00000507289 2297 ntBASIC17.52■□□□□ 0.4
TNFRSF1BP20333 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNFRSF1BP20333 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNFRSF1BP20333 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
TNFRSF1BP20333 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TNFRSF1BP20333 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
TNFRSF1BP20333 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC17.52■□□□□ 0.39
TNFRSF1BP20333 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNFRSF1BP20333 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
TNFRSF1BP20333 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TNFRSF1BP20333 FZD10-202ENST00000539839 3282 ntBASIC17.52■□□□□ 0.39
TNFRSF1BP20333 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
TNFRSF1BP20333 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
TNFRSF1BP20333 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
TNFRSF1BP20333 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
TNFRSF1BP20333 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.51■□□□□ 0.39
TNFRSF1BP20333 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.51■□□□□ 0.39
TNFRSF1BP20333 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
TNFRSF1BP20333 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms