Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CD58P19256 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CD58P19256 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CD58P19256 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD58P19256 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD58P19256 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC20.24■□□□□ 0.83
CD58P19256 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CD58P19256 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD58P19256 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CD58P19256 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CD58P19256 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD58P19256 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.24■□□□□ 0.83
CD58P19256 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC20.24■□□□□ 0.83
CD58P19256 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD58P19256 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC20.24■□□□□ 0.83
CD58P19256 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.24■□□□□ 0.83
CD58P19256 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.24■□□□□ 0.83
CD58P19256 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.24■□□□□ 0.83
CD58P19256 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.24■□□□□ 0.83
CD58P19256 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
CD58P19256 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CD58P19256 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.24■□□□□ 0.83
CD58P19256 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
CD58P19256 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.24■□□□□ 0.83
CD58P19256 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.24■□□□□ 0.83
CD58P19256 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD58P19256 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CD58P19256 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD58P19256 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD58P19256 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CD58P19256 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CD58P19256 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD58P19256 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.24■□□□□ 0.83
CD58P19256 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.24■□□□□ 0.83
CD58P19256 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD58P19256 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CD58P19256 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC20.23■□□□□ 0.83
CD58P19256 AC006333.2-201ENST00000607957 2099 ntBASIC20.23■□□□□ 0.83
CD58P19256 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.23■□□□□ 0.83
CD58P19256 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CD58P19256 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD58P19256 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.23■□□□□ 0.83
CD58P19256 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD58P19256 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD58P19256 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD58P19256 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD58P19256 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD58P19256 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CD58P19256 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC20.23■□□□□ 0.83
CD58P19256 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.23■□□□□ 0.83
CD58P19256 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.23■□□□□ 0.83
CD58P19256 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC20.23■□□□□ 0.83
CD58P19256 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.23■□□□□ 0.83
CD58P19256 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC20.23■□□□□ 0.83
CD58P19256 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
CD58P19256 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC20.23■□□□□ 0.83
CD58P19256 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
CD58P19256 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD58P19256 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.23■□□□□ 0.83
CD58P19256 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC20.23■□□□□ 0.83
CD58P19256 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.23■□□□□ 0.83
CD58P19256 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.23■□□□□ 0.83
CD58P19256 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CD58P19256 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD58P19256 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.22■□□□□ 0.83
CD58P19256 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD58P19256 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD58P19256 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CD58P19256 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD58P19256 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD58P19256 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CD58P19256 AC087499.1-201ENST00000418141 1075 ntBASIC20.22■□□□□ 0.83
CD58P19256 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CD58P19256 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CD58P19256 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.22■□□□□ 0.83
CD58P19256 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.22■□□□□ 0.83
CD58P19256 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.22■□□□□ 0.83
CD58P19256 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC20.22■□□□□ 0.83
CD58P19256 AC010947.1-201ENST00000623454 693 ntBASIC20.22■□□□□ 0.83
CD58P19256 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CD58P19256 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC20.22■□□□□ 0.83
CD58P19256 AC093503.3-201ENST00000624917 2352 ntBASIC20.22■□□□□ 0.83
CD58P19256 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD58P19256 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CD58P19256 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD58P19256 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CD58P19256 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CD58P19256 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CD58P19256 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CD58P19256 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
CD58P19256 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD58P19256 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CD58P19256 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD58P19256 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD58P19256 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.21■□□□□ 0.83
CD58P19256 NAPSB-206ENST00000562112 1266 ntBASIC20.21■□□□□ 0.83
CD58P19256 C2orf69P3-201ENST00000565542 1120 ntBASIC20.21■□□□□ 0.83
CD58P19256 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CD58P19256 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.21■□□□□ 0.83
CD58P19256 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms